RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 URGCPQ8TCY9 931 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MCOLN3Q8TDD5 553 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 DLG3Q92796 817 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 E2F7Q96AV8 911 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 APOPT1Q96IL0 206 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MARK4Q96L34 752 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CMTM3Q96MX0 182 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NAT9Q9BTE0 207 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 TXLNGYQ9BZA5 131 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ASPSCR1Q9BZE9 553 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 FOXP1Q9H334 677 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 NIT2Q9NQR4 276 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 GPRC5BQ9NZH0 403 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 GRHL1Q9NZI5 618 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 TMEM216Q9P0N5 145 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 VAV3Q9UKW4 847 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ENTPD4Q9Y227 616 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PCDHGB1Q9Y5G3 927 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PSAT1Q9Y617 370 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CLUHO75153 1309 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SF3B1O75533 1304 aaKnown RBP eCLIP2.76□□□□□ -1.97
LIG4-203ENST00000442234 TNKSO95271 1327 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ADGRA2Q96PE1 1338 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 WDR90Q96KV7 1748 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 OR5K3A6NET4 321 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 EPOPA6NHQ4 379 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MSCO60682 206 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PLA2G6O60733 806 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NIPSNAP2O75323 286 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MAFO75444 373 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 WDR47O94967 919 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 DEXIO95424 95 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 IFNB1P01574 187 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CD63P08962 238 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 UQCRFS1P1P0C7P4 283 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 HSPD1P10809 573 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 XRCC1P18887 633 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 IMPDH1P20839 514 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PSMA2P25787 234 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 RPL10P27635 214 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 DCKP27707 260 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ERP29P30040 261 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 YAP1P46937 504 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 SOX9P48436 509 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 LIG4P49917 911 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MEOX2P50222 304 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 TKTL1P51854 596 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 TMBIM6P55061 237 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 DEFA6Q01524 100 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 GRSF1Q12849 480 aaKnown RBP eCLIP2.76□□□□□ -1.97
LIG4-203ENST00000442234 COL9A2Q14055 689 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 CAPRIN1Q14444 709 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 CHI3L2Q15782 390 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ST3GAL2Q16842 350 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 KIF19Q2TAC6 998 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 EPC2Q52LR7 807 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 KLHL26Q53HC5 615 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 DCAF17Q5H9S7 520 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 COLEC12Q5KU26 742 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SPANXN2Q5MJ10 180 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SLC6A19Q695T7 634 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CASC4Q6P4E1 433 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ZNF574Q6ZN55 896 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 FAM124AQ86V42 546 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ZSWIM9Q86XI8 627 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 DDIASQ8IXT1 998 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 OFCC1Q8IZS5 231 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CLEC4FQ8N1N0 589 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PARP8Q8N3A8 854 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 OR4D10Q8NGI6 311 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CYP2W1Q8TAV3 490 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 STON2Q8WXE9 905 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 KLHL6Q8WZ60 621 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PFDN5Q99471 154 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PKP2Q99959 881 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MND1Q9BWT6 205 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PRDM8Q9NQV8 689 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 XPNPEP1Q9NQW7 623 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 TAS2R9Q9NYW1 312 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 LGALS13Q9UHV8 139 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CLEC4AQ9UMR7 237 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SRPK3Q9UPE1 567 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 AP4E1Q9UPM8 1137 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.76□□□□□ -1.97
LIG4-203ENST00000442234 VWA7Q9Y334 891 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CDY2AQ9Y6F7 541 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 COL4A5P29400 1685 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ANKHD1Q8IWZ3 2542 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 A0A087X0B3 334 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 A0A0G2JLL6 359 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 TP73O15350 636 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MICAL2O94851 1124 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SORBS2O94875 1100 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 HTR3BO95264 441 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PTTG1O95997 202 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ALBP02768 609 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NTRK1P04629 796 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SERPINA6P08185 405 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CLUP10909 449 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MYL4P12829 197 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms