RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 OSGEPL1Q9H4B0 414 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 DHX33Q9H6R0 707 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 ZNF552Q9H707 407 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 RPF1Q9H9Y2 349 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 GPN1Q9HCN4 374 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 SLC40A1Q9NP59 571 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 CNGB3Q9NQW8 809 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 CHRAC1Q9NRG0 131 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 TUBG2Q9NRH3 451 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 CNNM1Q9NRU3 951 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 ZNF275Q9NSD4 429 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 PCMTD2Q9NV79 361 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 KCNK4Q9NYG8 393 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 KLHL8Q9P2G9 620 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 MGAT4CQ9UBM8 478 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 TNFRSF10DQ9UBN6 386 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 CGGBP1Q9UFW8 167 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 VPS51Q9UID3 782 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 TRMT6Q9UJA5 497 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 DBNLQ9UJU6 430 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 TMEM59LQ9UK28 342 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 PADI1Q9ULC6 663 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 TMCO1Q9UM00 188 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 SPATA2Q9UM82 520 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 VPS4AQ9UN37 437 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 PCDHA6Q9UN73 950 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 AP4E1Q9UPM8 1137 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 SHOC2Q9UQ13 582 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 ENTPD4Q9Y227 616 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 DTX4Q9Y2E6 619 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 IFT52Q9Y366 437 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 LRRC42Q9Y546 428 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 PCDHB1Q9Y5F3 818 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 PCDHA3Q9Y5H8 950 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 SNX14Q9Y5W7 946 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 RAD54BQ9Y620 910 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 NUMBLQ9Y6R0 609 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 MYO15BQ96JP2 1530 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 CDHR2Q9BYE9 1310 aa3.93□□□□□ -1.78
R3HDM1-209ENST00000441871 CCDC187A0A096LP49 1063 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 A0A0J9YYE9 177 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 MEX3AA1L020 520 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 OR52A4PA6NMU1 304 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 ANXA2P2A6NMY6 339 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 CENPBD1B2RD01 187 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 HRKO00198 91 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 SOX1O00570 391 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 SLC30A4O14863 429 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 ADAMDEC1O15204 470 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 DENRO43583 198 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 STX10O60499 249 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 MSCO60682 206 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 TULP3O75386 442 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 TAF5LO75529 589 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 WBP4O75554 376 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 CLEC3AO75596 197 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 PDE9AO76083 593 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 KAT7O95251 611 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 IGLV1-40P01703 118 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 TRBC1P01850 177 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 FGBP02675 491 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 TFRCP02786 760 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 BMP3P12645 472 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 GNSP15586 552 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 TNNI3P19429 210 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 EIF2S2P20042 333 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 RAB4AP20338 218 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 MSR1P21757 451 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 ITGB7P26010 798 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 PTX3P26022 381 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 CD27P26842 260 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 CD40LGP29965 261 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 PBX3P40426 434 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 SLC26A3P40879 764 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 FRKP42685 505 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 SLC1A4P43007 532 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 SERPINB9P50453 376 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 CDK7P50613 346 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 CLCN7P51798 805 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 HK2P52789 917 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 MANFP55145 182 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 ITGA1P56199 1179 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 ANTXR2P58335 489 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 SP2Q02086 613 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 PTH1RQ03431 593 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 PPIGQ13427 754 aaKnown RBP eCLIP3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 PIGHQ14442 188 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 IL11RAQ14626 422 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 EPHA7Q15375 998 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 TSC22D1Q15714 1073 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 BTBD16Q32M84 506 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 XKR4Q5GH76 650 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 BEX5Q5H9J7 111 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 PITRM1Q5JRX3 1037 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 ZNF484Q5JVG2 852 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 WLSQ5T9L3 541 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 BTBD8Q5XKL5 378 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 STEAP3Q658P3 488 aa3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 SNRNP48Q6IEG0 339 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-209ENST00000441871 FSTL4Q6MZW2 842 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms