RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 GRAMD1AQ96CP6 724 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 PPP1R2P1Q96PQ5 205 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 VPS35Q96QK1 796 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 OSGEPL1Q9H4B0 414 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 RDH14Q9HBH5 336 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 KLC4Q9NSK0 619 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 PPP2R2CQ9Y2T4 447 aa13.57□□□□□ -0.24
LTBR-202ENST00000440421 ZFC3H1O60293 1989 aaKnown RBP13.57□□□□□ -0.24
LTBR-202ENST00000440421 CCDC187A0A096LP49 1063 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 GOLGA6L3A6NEY3 463 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 GPR89AB7ZAQ6 455 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 CHUKO15111 745 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 LIASO43766 372 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 VEGFDO43915 354 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 GPR89BP0CG08 455 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 LPOP22079 712 aaPredicted RBP13.56□□□□□ -0.24
LTBR-202ENST00000440421 CA5AP35218 305 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 PPM1FP49593 454 aaPredicted RBP13.56□□□□□ -0.24
LTBR-202ENST00000440421 TMPRSS15P98073 1019 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 TMEM115Q12893 351 aaPredicted RBP13.56□□□□□ -0.24
LTBR-202ENST00000440421 GTF2H3Q13889 308 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 TBC1D25Q3MII6 688 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 NKAIN2Q5VXU1 208 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 DENND5AQ6IQ26 1287 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 TMPRSS9Q7Z410 1059 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 LRRTM4Q86VH4 590 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 LSMEM2Q8N112 164 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 SFRP1Q8N474 314 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 OR4K2Q8NGD2 314 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 OR13C4Q8NGS5 318 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 WDR36Q8NI36 951 aaKnown RBP13.56□□□□□ -0.24
LTBR-202ENST00000440421 UBE2Q2Q8WVN8 375 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 FGF11Q92914 225 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 LRRC45Q96CN5 670 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 TTC25Q96NG3 672 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 TMEM74Q96NL1 305 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 PRDM8Q9NQV8 689 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.56□□□□□ -0.24
LTBR-202ENST00000440421 SLC23A2Q9UGH3 650 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 FKBPLQ9UIM3 349 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 ZNF148Q9UQR1 794 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 DNAJC16Q9Y2G8 782 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 ASPMQ8IZT6 3477 aa13.56□□□□□ -0.24
LTBR-202ENST00000440421 FREM2Q5SZK8 3169 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 APC2O95996 2303 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 GAPDHSO14556 408 aaPredicted RBP13.55□□□□□ -0.24
LTBR-202ENST00000440421 KMOO15229 486 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 PPFIA2O75334 1257 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 PRAMEF1O95521 474 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 CRTAMO95727 393 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 IFNB1P01574 187 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 ZNF7P17097 686 aaPredicted RBP13.55□□□□□ -0.24
LTBR-202ENST00000440421 TPH1P17752 444 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 RBMS1P29558 406 aaKnown RBP13.55□□□□□ -0.24
LTBR-202ENST00000440421 MSLNQ13421 630 aaPredicted RBP13.55□□□□□ -0.24
LTBR-202ENST00000440421 NFATC2Q13469 925 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 ITGA9Q13797 1035 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 NR1D2Q14995 579 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 OASLQ15646 514 aaKnown RBP13.55□□□□□ -0.24
LTBR-202ENST00000440421 P3H1Q32P28 736 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 LDLRAP1Q5SW96 308 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 PHF19Q5T6S3 580 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 GPRC6AQ5T6X5 926 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 KCTD11Q693B1 232 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 IYDQ6PHW0 289 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 PRUNE1Q86TP1 453 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 TRAPPC5Q8IUR0 188 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 ZNF547Q8IVP9 402 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 KLHDC8BQ8IXV7 354 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 TRIM58Q8NG06 486 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 ZNF398Q8TD17 642 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 BRSK1Q8TDC3 778 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 NAF1Q96HR8 494 aaKnown RBP13.55□□□□□ -0.24
LTBR-202ENST00000440421 NUDT22Q9BRQ3 303 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 STRADBQ9C0K7 418 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 SEMA6CQ9H3T2 930 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 LRRC40Q9H9A6 602 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 PIH1D1Q9NWS0 290 aaKnown RBP13.55□□□□□ -0.24
LTBR-202ENST00000440421 KCNK4Q9NYG8 393 aa13.55□□□□□ -0.24
LTBR-202ENST00000440421 RALYQ9UKM9 306 aaKnown RBP13.55□□□□□ -0.24
LTBR-202ENST00000440421 DMXL2Q8TDJ6 3036 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 KIF26BQ2KJY2 2108 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 A6NCN8 305 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 TMX2-CTNND1H3BSU7 103 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 CCL22O00626 93 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 ZW10O43264 779 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 DXOO77932 396 aaKnown RBP13.54□□□□□ -0.24
LTBR-202ENST00000440421 TNFSF15O95150 251 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 CPNE6O95741 557 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 F3P13726 295 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 HGFP14210 728 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 ETS1P14921 441 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 CD1CP29017 333 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 AKT1P31749 480 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 STIP1P31948 543 aaKnown RBP13.54□□□□□ -0.24
LTBR-202ENST00000440421 CCKBRP32239 447 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 EIF2S3P41091 472 aaKnown RBP13.54□□□□□ -0.24
LTBR-202ENST00000440421 GPR3P46089 330 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 FASLGP48023 281 aa13.54□□□□□ -0.24
LTBR-202ENST00000440421 HHEXQ03014 270 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms