RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 C3orf38Q5JPI3 329 aa20.24■□□□□ 0.83
UBE2F-212ENST00000439338 B3GNT8Q7Z7M8 397 aa20.24■□□□□ 0.83
UBE2F-212ENST00000439338 OR4K2Q8NGD2 314 aa20.24■□□□□ 0.83
UBE2F-212ENST00000439338 DTX3LQ8TDB6 740 aa20.24■□□□□ 0.83
UBE2F-212ENST00000439338 GRAMD1AQ96CP6 724 aa20.24■□□□□ 0.83
UBE2F-212ENST00000439338 TLR10Q9BXR5 811 aa20.24■□□□□ 0.83
UBE2F-212ENST00000439338 UGT1A7Q9HAW7 530 aa20.24■□□□□ 0.83
UBE2F-212ENST00000439338 UGT1A10Q9HAW8 530 aa20.24■□□□□ 0.83
UBE2F-212ENST00000439338 UGT1A8Q9HAW9 530 aa20.24■□□□□ 0.83
UBE2F-212ENST00000439338 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.24■□□□□ 0.83
UBE2F-212ENST00000439338 TBC1D29Q9UFV1 150 aa20.24■□□□□ 0.83
UBE2F-212ENST00000439338 KCTD3Q9Y597 815 aa20.24■□□□□ 0.83
UBE2F-212ENST00000439338 CELSR3Q9NYQ7 3312 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 TRBV23OR9-2A0A075B6M9 112 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 A0A1W2PNU3 283 aaPredicted RBP20.23■□□□□ 0.83
UBE2F-212ENST00000439338 VEGFDO43915 354 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 SNX2O60749 519 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 PPFIA2O75334 1257 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 CDK14O94921 469 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 OR1D5P58170 312 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 B4GALNT1Q00973 533 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 SIX1Q15475 284 aaPredicted RBP20.23■□□□□ 0.83
UBE2F-212ENST00000439338 LRRTM4Q86VH4 590 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 BRSK1Q8TDC3 778 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 SLC37A2Q8TED4 501 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 FOXP3Q9BZS1 431 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 LRRC40Q9H9A6 602 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 POLR1BQ9H9Y6 1135 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 ARNT2Q9HBZ2 717 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 KLC4Q9NSK0 619 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 FEZ2Q9UHY8 353 aaPredicted RBP20.23■□□□□ 0.83
UBE2F-212ENST00000439338 FKBPLQ9UIM3 349 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 SATB2Q9UPW6 733 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 ZNF148Q9UQR1 794 aa20.23■□□□□ 0.83
UBE2F-212ENST00000439338 PPM1DO15297 605 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 B4GAT1O43505 415 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 TLX3O43711 291 aaPredicted RBP20.22■□□□□ 0.83
UBE2F-212ENST00000439338 PRAMEF1O95521 474 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 CRTAMO95727 393 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 IFNB1P01574 187 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 STIP1P31948 543 aaKnown RBP20.22■□□□□ 0.83
UBE2F-212ENST00000439338 LSSP48449 732 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 TMEM115Q12893 351 aaPredicted RBP20.22■□□□□ 0.83
UBE2F-212ENST00000439338 ITGA9Q13797 1035 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 GTF2H3Q13889 308 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 NR1D2Q14995 579 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 INSCQ1MX18 579 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 SFRP1Q8N474 314 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 OSGEPL1Q9H4B0 414 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 SLC23A2Q9UGH3 650 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 LAMA5O15230 3695 aa20.22■□□□□ 0.83
UBE2F-212ENST00000439338 PMS2P1A4D2B8 440 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 A6NCN8 305 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 KMOO15229 486 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 AP2A1O95782 977 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 ALDH4A1P30038 563 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 CLCNKAP51800 687 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 ZNF140P52738 457 aaPredicted RBP20.21■□□□□ 0.83
UBE2F-212ENST00000439338 INHBCP55103 352 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 TMPRSS15P98073 1019 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 AMZ1Q400G9 498 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 MAP9Q49MG5 647 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 GPRC6AQ5T6X5 926 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 PRUNE1Q86TP1 453 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 TRAPPC5Q8IUR0 188 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 ZNF547Q8IVP9 402 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 DDHD1Q8NEL9 900 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 OR13C4Q8NGS5 318 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 ZNF398Q8TD17 642 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 TIMM29Q9BSF4 260 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 EPB41L5Q9HCM4 733 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 SMOXQ9NWM0 555 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 PIH1D1Q9NWS0 290 aaKnown RBP20.21■□□□□ 0.83
UBE2F-212ENST00000439338 DNAJC16Q9Y2G8 782 aa20.21■□□□□ 0.83
UBE2F-212ENST00000439338 CCDC187A0A096LP49 1063 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 PSMD3O43242 534 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 FGGP02679 453 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 F3P13726 295 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 ETS1P14921 441 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 ZNF7P17097 686 aaPredicted RBP20.2■□□□□ 0.82
UBE2F-212ENST00000439338 TPH1P17752 444 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 GPR3P46089 330 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 FASLGP48023 281 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 PDE1BQ01064 536 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 TBC1D25Q3MII6 688 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 LDLRAP1Q5SW96 308 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 IYDQ6PHW0 289 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 FOXR1Q6PIV2 292 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 TMPRSS9Q7Z410 1059 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 ZNF761Q86XN6 746 aaPredicted RBP20.2■□□□□ 0.82
UBE2F-212ENST00000439338 WDR36Q8NI36 951 aaKnown RBP20.2■□□□□ 0.82
UBE2F-212ENST00000439338 LIN37Q96GY3 246 aaPredicted RBP20.2■□□□□ 0.82
UBE2F-212ENST00000439338 TTC25Q96NG3 672 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 TMEM74Q96NL1 305 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 ZCCHC2Q9C0B9 1178 aaKnown RBP20.2■□□□□ 0.82
UBE2F-212ENST00000439338 PRDM8Q9NQV8 689 aa20.2■□□□□ 0.82
UBE2F-212ENST00000439338 CCL22O00626 93 aa20.19■□□□□ 0.82
UBE2F-212ENST00000439338 LDB2O43679 373 aa20.19■□□□□ 0.82
UBE2F-212ENST00000439338 CEP104O60308 925 aa20.19■□□□□ 0.82
UBE2F-212ENST00000439338 SRP72O76094 671 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms