RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 SOX13Q9UN79 622 aa15.98■□□□□ 0.15
SNRPB-202ENST00000438552 GPSM3Q9Y4H4 160 aa15.98■□□□□ 0.15
SNRPB-202ENST00000438552 SPTBN4Q9H254 2564 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 DCDC2BA2VCK2 349 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 TRIM38O00635 465 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 TP73O15350 636 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 NUAK1O60285 661 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 CBFA2T3O75081 653 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 GOT2P00505 430 aaKnown RBP15.97■□□□□ 0.15
SNRPB-202ENST00000438552 KCNA4P22459 653 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 FOXN2P32314 431 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 PRAMEP78395 509 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 ELOCQ15369 112 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 PLA2G4EQ3MJ16 856 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 PYCR3Q53H96 274 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 LDLRAP1Q5SW96 308 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 FNBP1LQ5T0N5 605 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 PSAPL1Q6NUJ1 521 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 AFTPHQ6ULP2 937 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 PIANPQ8IYJ0 282 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 NXPE1Q8N323 547 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 NOA1Q8NC60 698 aaKnown RBP15.97■□□□□ 0.15
SNRPB-202ENST00000438552 MNS1Q8NEH6 495 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 OR4C6Q8NH72 309 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 BAHD1Q8TBE0 780 aaPredicted RBP15.97■□□□□ 0.15
SNRPB-202ENST00000438552 NAT14Q8WUY8 206 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 MFSD3Q96ES6 412 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 PWWP2AQ96N64 755 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 ERP44Q9BS26 406 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 KIFC1Q9BW19 673 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 ZCCHC2Q9C0B9 1178 aaKnown RBP15.97■□□□□ 0.15
SNRPB-202ENST00000438552 MRM3Q9HC36 420 aaKnown RBP15.97■□□□□ 0.15
SNRPB-202ENST00000438552 TREX1Q9NSU2 369 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 NLGN3Q9NZ94 848 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 ZNHIT2Q9UHR6 403 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 PLEKHM1Q9Y4G2 1056 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 ST14Q9Y5Y6 855 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 CSNK1G3Q9Y6M4 447 aa15.97■□□□□ 0.15
SNRPB-202ENST00000438552 TRBV5-4A0A0C4DH59 114 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 CTAGE15A4D2H0 777 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 NEMP2A6NFY4 417 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 AGAP14A8MT82 685 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 LMO7DNF2Z398 122 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 GIPC1O14908 333 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 SIGLEC6O43699 453 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 VEGFDO43915 354 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 ZNF500O60304 480 aaPredicted RBP15.96■□□□□ 0.15
SNRPB-202ENST00000438552 CDK14O94921 469 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 ANXA6P08133 673 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 CTAGE8P0CG41 777 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 CSRP1P21291 193 aaKnown RBP15.96■□□□□ 0.15
SNRPB-202ENST00000438552 AK4P27144 223 aaPredicted RBP15.96■□□□□ 0.15
SNRPB-202ENST00000438552 NOVA1P51513 510 aaKnown RBP15.96■□□□□ 0.15
SNRPB-202ENST00000438552 CTBSQ01459 385 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 CACNG1Q06432 222 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 TMEM115Q12893 351 aaPredicted RBP15.96■□□□□ 0.15
SNRPB-202ENST00000438552 GTF2H3Q13889 308 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 MSS51Q4VC12 460 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 DUPD1Q68J44 220 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 DET1Q7L5Y6 550 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 TAS2R42Q7RTR8 314 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 CTAGE6Q86UF2 777 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 SERPINA9Q86WD7 417 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 NRROSQ86YC3 692 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 CTAGE4Q8IX94 777 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 PNPLA1Q8N8W4 532 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 RASGEF1AQ8N9B8 481 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 OR6P1Q8NGX9 317 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 PEX13Q92968 403 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 ZNF669Q96BR6 464 aaPredicted RBP15.96■□□□□ 0.15
SNRPB-202ENST00000438552 ULK4Q96C45 1275 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 SLC32A1Q9H598 525 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 RMI1Q9H9A7 625 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 TRNAU1APQ9NX07 287 aaKnown RBP15.96■□□□□ 0.15
SNRPB-202ENST00000438552 FTSJ1Q9UET6 329 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 ANAPC5Q9UJX4 755 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 DOLKQ9UPQ8 538 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 MAD1L1Q9Y6D9 718 aa15.96■□□□□ 0.15
SNRPB-202ENST00000438552 ARHGEF17Q96PE2 2063 aaPredicted RBP15.95■□□□□ 0.14
SNRPB-202ENST00000438552 SDR42E2A6NKP2 422 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 CHUKO15111 745 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 YY2O15391 372 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 GRID2O43424 1007 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 ALPPL2P10696 532 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 ACP5P13686 325 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 MSH3P20585 1137 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 ACRV1P26436 265 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 ID4P47928 161 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 B4GALNT1Q00973 533 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 SLC7A5Q01650 507 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 DHX9Q08211 1270 aaKnown RBP15.95■□□□□ 0.14
SNRPB-202ENST00000438552 ILF3Q12906 894 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNRPB-202ENST00000438552 DBN1Q16643 649 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 BBS9Q3SYG4 887 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 GPR33Q49SQ1 333 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 SLC30A9Q6PML9 568 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 CHST15Q7LFX5 561 aaPredicted RBP15.95■□□□□ 0.14
SNRPB-202ENST00000438552 TAF8Q7Z7C8 310 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 GKN2Q86XP6 184 aa15.95■□□□□ 0.14
SNRPB-202ENST00000438552 TRAPPC5Q8IUR0 188 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms