RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CYP1A2P05177 515 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 PDHA1P08559 390 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 THRAP10827 490 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 FGF3P11487 239 aaPredicted RBP7.69□□□□□ -1.18
VPS50-204ENST00000438395 CSF2RBP32927 897 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 UGT1A3P35503 534 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 TSPAN7P41732 249 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 CCR10P46092 362 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 FASLGP48023 281 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 CYP4F2P78329 520 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 ZBED6P86452 979 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 SLC25A11Q02978 314 aaKnown RBP7.69□□□□□ -1.18
VPS50-204ENST00000438395 GALNT2Q10471 571 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 KIR2DS5Q14953 304 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 PDK2Q15119 407 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 PYCR3Q53H96 274 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 CCDC70Q6NSX1 233 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 TMEM71Q6P5X7 295 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 ALKBH5Q6P6C2 394 aaKnown RBP7.69□□□□□ -1.18
VPS50-204ENST00000438395 CEACAM20Q6UY09 585 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 CHST15Q7LFX5 561 aaPredicted RBP7.69□□□□□ -1.18
VPS50-204ENST00000438395 TECPR1Q7Z6L1 1165 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 SLC9B2Q86UD5 537 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 DTX1Q86Y01 620 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 SFRP1Q8N474 314 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 EXD3Q8N9H8 876 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.69□□□□□ -1.18
VPS50-204ENST00000438395 CPLX3Q8WVH0 158 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 NCSTNQ92542 709 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 NKD1Q969G9 470 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 SCARF2Q96GP6 870 aaPredicted RBP7.69□□□□□ -1.18
VPS50-204ENST00000438395 BTBD6Q96KE9 485 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 NSMCE3Q96MG7 304 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 NAP1L5Q96NT1 182 aaPredicted RBP7.69□□□□□ -1.18
VPS50-204ENST00000438395 CATSPER2Q96P56 530 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 ZPBPQ9BS86 351 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 SPATA16Q9BXB7 569 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 TDRD1Q9BXT4 1180 aaKnown RBP7.69□□□□□ -1.18
VPS50-204ENST00000438395 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.69□□□□□ -1.18
VPS50-204ENST00000438395 ADNPQ9H2P0 1102 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 DEF6Q9H4E7 631 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 FAM83DQ9H4H8 585 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 RMI1Q9H9A7 625 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 PCDH9Q9HC56 1237 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 SARS2Q9NP81 518 aaKnown RBP7.69□□□□□ -1.18
VPS50-204ENST00000438395 RAD18Q9NS91 495 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 STARD5Q9NSY2 213 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 GEMIN8Q9NWZ8 242 aaKnown RBP7.69□□□□□ -1.18
VPS50-204ENST00000438395 TMEM63CQ9P1W3 806 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 KCNK6Q9Y257 313 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 PRKAB1Q9Y478 270 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 B3GALT1Q9Y5Z6 326 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 NBASA2RRP1 2371 aa7.69□□□□□ -1.18
VPS50-204ENST00000438395 A0A0U1RQS6 177 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 LRRD1A4D1F6 860 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 RGSL1A5PLK6 1076 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 OR5K4A6NMS3 321 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 PDZK1P1A8MUH7 402 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 ARHGAP6O43182 974 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 PROSCO94903 275 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 CLDN7O95471 211 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 FUCA1P04066 466 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 TPM1P09493 284 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 PRKAR1AP10644 381 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 LIFP15018 202 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 VCLP18206 1134 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 CCNCP24863 283 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 MAP4P27816 1152 aaKnown RBP7.68□□□□□ -1.18
VPS50-204ENST00000438395 CD86P42081 329 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 EPHA4P54764 986 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 POLE2P56282 527 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 UBASH3AP57075 661 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 FANCCQ00597 558 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 NFKB2Q00653 900 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 MC1RQ01726 317 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 KCNAB2Q13303 367 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 SQSTM1Q13501 440 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 SEPT6Q14141 434 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 DPYSL3Q14195 570 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 PAFAH1B3Q15102 231 aaKnown RBP7.68□□□□□ -1.18
VPS50-204ENST00000438395 PTPRRQ15256 657 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 INSCQ1MX18 579 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 LINC00303Q3SY05 128 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 ANKS6Q68DC2 871 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 NCBP2-AS2Q69YL0 99 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 TXNRD3NBQ6F5E7 133 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 ALG1LQ6GMV1 187 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 WDR74Q6RFH5 385 aaPredicted RBP7.68□□□□□ -1.18
VPS50-204ENST00000438395 ZNF574Q6ZN55 896 aaPredicted RBP7.68□□□□□ -1.18
VPS50-204ENST00000438395 C1orf229Q6ZS94 237 aaPredicted RBP7.68□□□□□ -1.18
VPS50-204ENST00000438395 RFLNAQ6ZTI6 216 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 NLRP8Q86W28 1048 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 PLXDC1Q8IUK5 500 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 RAVER1Q8IY67 606 aaKnown RBP7.68□□□□□ -1.18
VPS50-204ENST00000438395 CCDC13Q8IYE1 715 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 ZNF295-AS1Q8N0V1 137 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 NLGN4XQ8N0W4 816 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 CBARPQ8N350 705 aaPredicted RBP7.68□□□□□ -1.18
VPS50-204ENST00000438395 TEX26Q8N6G2 289 aa7.68□□□□□ -1.18
VPS50-204ENST00000438395 NLGN4YQ8NFZ3 816 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 202.7 ms