RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 PPP1R3BQ86XI6 285 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 LPCAT1Q8NF37 534 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 RSC1A1Q92681 617 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 CUEDC1Q9NWM3 386 aaPredicted RBP14.6□□□□□ -0.07
HDAC8-213ENST00000436675 ZNF624Q9P2J8 865 aaPredicted RBP14.6□□□□□ -0.07
HDAC8-213ENST00000436675 DNAJC16Q9Y2G8 782 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 PCDHGA6Q9Y5G7 932 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 C1orf232A0A0U1RR37 186 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 NUAK1O60285 661 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 SORBS2O94875 1100 aaKnown RBP14.59□□□□□ -0.07
HDAC8-213ENST00000436675 FGF5P12034 268 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 IL1R2P27930 398 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 KCNAB1Q14722 419 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 TDRD12Q587J7 1177 aaKnown RBP14.59□□□□□ -0.07
HDAC8-213ENST00000436675 CDKAL1Q5VV42 579 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 MAMDC2Q7Z304 686 aaPredicted RBP14.59□□□□□ -0.07
HDAC8-213ENST00000436675 POLNQ7Z5Q5 900 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 PSTKQ8IV42 348 aaKnown RBP14.59□□□□□ -0.07
HDAC8-213ENST00000436675 ZNF653Q96CK0 615 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 CSPG4P5Q96PW8 444 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 FAM83DQ9H4H8 585 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 RMI1Q9H9A7 625 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 ACSS2Q9NR19 701 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.59□□□□□ -0.07
HDAC8-213ENST00000436675 TRIM10Q9UDY6 481 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 SLC23A2Q9UGH3 650 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 SPTBP11277 2137 aa14.59□□□□□ -0.07
HDAC8-213ENST00000436675 PDZK1P1A8MUH7 402 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 DDAH2O95865 285 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 MT-ND3P03897 115 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 XRCC1P18887 633 aaPredicted RBP14.58□□□□□ -0.08
HDAC8-213ENST00000436675 SPINT3P49223 89 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 ZNF135P52742 658 aaPredicted RBP14.58□□□□□ -0.08
HDAC8-213ENST00000436675 PPP1CAP62136 330 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 UBXN1Q04323 297 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 IL10RAQ13651 578 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 INSCQ1MX18 579 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.58□□□□□ -0.08
HDAC8-213ENST00000436675 HENMT1Q5T8I9 393 aaKnown RBP14.58□□□□□ -0.08
HDAC8-213ENST00000436675 ALS2CLQ60I27 953 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 PWWP2BQ6NUJ5 590 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 TTC30BQ8N4P2 665 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 AVL9Q8NBF6 648 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 LRRN4Q8WUT4 740 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 POLR1EQ9GZS1 481 aaKnown RBP14.58□□□□□ -0.08
HDAC8-213ENST00000436675 BRD8Q9H0E9 1235 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 ING2Q9H160 280 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 CARD9Q9H257 536 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 FANCLQ9NW38 375 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 DTLQ9NZJ0 730 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 MYO1AQ9UBC5 1043 aa14.58□□□□□ -0.08
HDAC8-213ENST00000436675 OR52A4PA6NMU1 304 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 C21orf140B9A014 251 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 TOX3O15405 576 aaPredicted RBP14.57□□□□□ -0.08
HDAC8-213ENST00000436675 KRT86O43790 486 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 MTA2O94776 668 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 RECKO95980 971 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 PRLP01236 227 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 FOLR1P15328 257 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 FERP16591 822 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 RPL10P27635 214 aaKnown RBP14.57□□□□□ -0.08
HDAC8-213ENST00000436675 PTPN4P29074 926 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 TUBB3Q13509 450 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 GPR18Q14330 331 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 DPYSL2Q16555 572 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 UGT8Q16880 541 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 TXNRD3NBQ6F5E7 133 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 JMJD6Q6NYC1 403 aaPredicted RBP14.57□□□□□ -0.08
HDAC8-213ENST00000436675 CERS6Q6ZMG9 384 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 PRSS42Q7Z5A4 293 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 SRRM1Q8IYB3 904 aaKnown RBP14.57□□□□□ -0.08
HDAC8-213ENST00000436675 TEX26Q8N6G2 289 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 AOPEPQ8N6M6 819 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 SIDT2Q8NBJ9 832 aaKnown RBP14.57□□□□□ -0.08
HDAC8-213ENST00000436675 ENOX1Q8TC92 643 aaKnown RBP14.57□□□□□ -0.08
HDAC8-213ENST00000436675 KLHL6Q8WZ60 621 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 TCTN2Q96GX1 697 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 SPATA16Q9BXB7 569 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 TDRD1Q9BXT4 1180 aaKnown RBP14.57□□□□□ -0.08
HDAC8-213ENST00000436675 UCK1Q9HA47 277 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 PCDH9Q9HC56 1237 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 PDE7BQ9NP56 450 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 SLAMF7Q9NQ25 335 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 PKD2L2Q9NZM6 624 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 RARRES3Q9UL19 164 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 MDC1Q14676 2089 aaKnown RBP14.57□□□□□ -0.08
HDAC8-213ENST00000436675 POLQO75417 2590 aa14.57□□□□□ -0.08
HDAC8-213ENST00000436675 DIDO1Q9BTC0 2240 aaKnown RBP14.56□□□□□ -0.08
HDAC8-213ENST00000436675 IGHV5-51A0A0C4DH38 117 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 GOLGA6L3A6NEY3 463 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 A6NL46 340 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 MTX2O75431 263 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 SLC25A14O95258 325 aaPredicted RBP14.56□□□□□ -0.08
HDAC8-213ENST00000436675 SLC4A1P02730 911 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 RARAP10276 462 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 NELFEP18615 380 aaKnown RBP14.56□□□□□ -0.08
HDAC8-213ENST00000436675 IL4RP24394 825 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 PTGIRP43119 386 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 CAPZBP47756 277 aa14.56□□□□□ -0.08
HDAC8-213ENST00000436675 DRG2P55039 364 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms