RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 LYSMD3Q7Z3D4 306 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 NLRP8Q86W28 1048 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 PLXDC1Q8IUK5 500 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 RAVER1Q8IY67 606 aaKnown RBP7.68□□□□□ -1.18
VPS50-203ENST00000436177 CCDC13Q8IYE1 715 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 NLGN4XQ8N0W4 816 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 CBARPQ8N350 705 aaPredicted RBP7.68□□□□□ -1.18
VPS50-203ENST00000436177 TEX26Q8N6G2 289 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 NLGN4YQ8NFZ3 816 aaPredicted RBP7.68□□□□□ -1.18
VPS50-203ENST00000436177 MAML1Q92585 1016 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 FATE1Q969F0 183 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 TSGA13Q96PP4 275 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 FUCA2Q9BTY2 467 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 MLPHQ9BV36 600 aaPredicted RBP7.68□□□□□ -1.18
VPS50-203ENST00000436177 MAK16Q9BXY0 300 aaKnown RBP7.68□□□□□ -1.18
VPS50-203ENST00000436177 SLC25A18Q9H1K4 315 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 TRIT1Q9H3H1 467 aaKnown RBP7.68□□□□□ -1.18
VPS50-203ENST00000436177 ZNHIT6Q9NWK9 470 aaKnown RBP7.68□□□□□ -1.18
VPS50-203ENST00000436177 UVRAGQ9P2Y5 699 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 KLHL3Q9UH77 587 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 IL17BQ9UHF5 180 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 PPIL1Q9Y3C6 166 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 PLEKHM1Q9Y4G2 1056 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 HEY1Q9Y5J3 304 aa7.68□□□□□ -1.18
VPS50-203ENST00000436177 UBR5O95071 2799 aaPredicted RBP7.67□□□□□ -1.18
VPS50-203ENST00000436177 A0A087X0T9 212 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 GPR89AB7ZAQ6 455 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 CFAP99D6REC4 459 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 KCNK1O00180 336 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 PPP1R12AO14974 1030 aaPredicted RBP7.67□□□□□ -1.18
VPS50-203ENST00000436177 POLR1CO15160 346 aaPredicted RBP7.67□□□□□ -1.18
VPS50-203ENST00000436177 GRID2O43424 1007 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 FZD6O60353 706 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 MAN1A2O60476 641 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 RASSF9O75901 435 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 SLC25A14O95258 325 aaPredicted RBP7.67□□□□□ -1.18
VPS50-203ENST00000436177 SOD1P00441 154 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 VIPP01282 170 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 JCHAINP01591 159 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 HLA-DQB2P05538 268 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 CD48P09326 243 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 H2AFZP0C0S5 128 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 FAM228BP0C875 321 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 GPR89BP0CG08 455 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 F3P13726 295 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 WT1P19544 449 aaPredicted RBP7.67□□□□□ -1.18
VPS50-203ENST00000436177 SPINT3P49223 89 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 GBE1Q04446 702 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 FOXM1Q08050 763 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 AP1B1Q10567 949 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 GTF2H3Q13889 308 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 ALS2CLQ60I27 953 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 HGSNATQ68CP4 663 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 DESI1Q6ICB0 168 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 CRTC3Q6UUV7 619 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 H2AFVQ71UI9 128 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 ESX1Q8N693 406 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 C9orf43Q8TAL5 461 aaPredicted RBP7.67□□□□□ -1.18
VPS50-203ENST00000436177 GDAP1Q8TB36 358 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 HTR3CQ8WXA8 447 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 PMEPA1Q969W9 287 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 COL26A1Q96A83 441 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 ITPKCQ96DU7 683 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 COX14Q96I36 57 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 SLC45A3Q96JT2 553 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 TTC25Q96NG3 672 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 SMIM14Q96QK8 99 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 LYSMD1Q96S90 227 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 SRPK1Q96SB4 655 aaKnown RBP7.67□□□□□ -1.18
VPS50-203ENST00000436177 AGAP2Q99490 1192 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 CTRCQ99895 268 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 ZSCAN5AQ9BUG6 496 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 GPR63Q9BZJ6 419 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 OR2AG1Q9H205 316 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 CARD9Q9H257 536 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 ZFYVE1Q9HBF4 777 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 OCIAD1Q9NX40 245 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 TMEM9Q9P0T7 183 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 CPNE7Q9UBL6 633 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 TBC1D29Q9UFV1 150 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 TUBD1Q9UJT1 453 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 CAPN11Q9UMQ6 739 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 ST14Q9Y5Y6 855 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 FLNCQ14315 2725 aa7.67□□□□□ -1.18
VPS50-203ENST00000436177 COL27A1Q8IZC6 1860 aaPredicted RBP7.66□□□□□ -1.18
VPS50-203ENST00000436177 ANKRD36A6QL64 1941 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 LRP4O75096 1905 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 LILRA5A6NI73 299 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 ANKRD66B4E2M5 251 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 APOL1O14791 398 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 DNAJC6O75061 913 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 STK17BO94768 372 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 KRT1P04264 644 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 ZFXP17010 805 aaPredicted RBP7.66□□□□□ -1.18
VPS50-203ENST00000436177 AMD1P17707 334 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 HALP42357 657 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 DCDC1P59894 354 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 MC2RQ01718 297 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 TLE1Q04724 770 aa7.66□□□□□ -1.18
VPS50-203ENST00000436177 NIPAL4Q0D2K0 466 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms