RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 ZNF140P52738 457 aaPredicted RBP10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 PRKCQQ04759 706 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 TYSND1Q2T9J0 566 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 RABL3Q5HYI8 236 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 FAM26DQ5JW98 314 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 RTP2Q5QGT7 225 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 PSAPL1Q6NUJ1 521 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 RMDN1Q96DB5 314 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 UHRF1Q96T88 793 aaPredicted RBP10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 TMEM79Q9BSE2 394 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 MRPS26Q9BYN8 205 aaKnown RBP10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 BPIFA1Q9NP55 256 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 FAIMQ9NVQ4 179 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 CNOT11Q9UKZ1 510 aaKnown RBP10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 PCDHGC4Q9Y5F7 938 aa10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 ZFP37Q9Y6Q3 630 aaPredicted RBP10.34□□□□□ -0.75
CLSTN1-203ENST00000435891 TMEM189-UBE2V1I3L0A0 370 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 SCAMP3O14828 347 aaKnown RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 HTRA2O43464 458 aaPredicted RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 KDM1AO60341 852 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 NIPSNAP2O75323 286 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 GJB5O95377 273 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 NDST3O95803 873 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 MAGEA11P43364 429 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 ATP4BP51164 291 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 YBEYP58557 167 aaPredicted RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 MRPL58Q14197 206 aaKnown RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 USP41Q3LFD5 358 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 PLA2G4EQ3MJ16 856 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 HACD2Q6Y1H2 254 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 TAS1R1Q7RTX1 841 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 CARM1Q86X55 608 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 EPHX4Q8IUS5 362 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 MIER2Q8N344 545 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 OR2T34Q8NGX1 318 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 OR2T3Q8NH03 318 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 RHEBL1Q8TAI7 183 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 FUBP1Q96AE4 644 aaKnown RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 THAP11Q96EK4 314 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 OLAHQ9NV23 265 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 TSR3Q9UJK0 312 aaKnown RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 RNF112Q9ULX5 631 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 FRMPD3Q5JV73 1810 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 DLGAP1O14490 977 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 MTHFD1P11586 935 aaKnown RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 ATF6P18850 670 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 KPNA1P52294 538 aaPredicted RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 HK3P52790 923 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 CDH15P55291 814 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 RELAQ04206 551 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 INAQ16352 499 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 RGMBQ6NW40 437 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 ZBTB49Q6ZSB9 765 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 IFNEQ86WN2 208 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 FBXO39Q8N4B4 442 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 DNAJB14Q8TBM8 379 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 KIAA1191Q96A73 305 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 CLIP3Q96DZ5 547 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 BIRC8Q96P09 236 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 FAM193BQ96PV7 902 aaPredicted RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 MGME1Q9BQP7 344 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 TFB2MQ9H5Q4 396 aaKnown RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 SDR39U1Q9NRG7 319 aaPredicted RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 ABCD2Q9UBJ2 740 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 ITGB1BP2Q9UKP3 347 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 COQ6Q9Y2Z9 468 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 CHD5Q8TDI0 1954 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 TMEM88BA6NKF7 163 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 ADAM12O43184 909 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 KERAO60938 352 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 CBFA2T3O75081 653 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 EOMESO95936 686 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 EPOP01588 193 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 ZFP36L2P47974 494 aaKnown RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 HSPA13P48723 471 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 ARPC4P59998 168 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 TXNL4AP83876 142 aaKnown RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 CREB5Q02930 508 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 GNA12Q03113 381 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 PTPRNQ16849 979 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 PAGE3Q5JUK9 113 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 LPCAT2Q7L5N7 544 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 GLT6D1Q7Z4J2 308 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 SYVN1Q86TM6 617 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 SIDT2Q8NBJ9 832 aaKnown RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 DDHD1Q8NEL9 900 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 OR2T11Q8NH01 316 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 ROPN1LQ96C74 230 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 DUS3LQ96G46 650 aaKnown RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 CDK15Q96Q40 435 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 HBEGFQ99075 208 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 CCT7Q99832 543 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 HEPHQ9BQS7 1158 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 C1orf50Q9BV19 199 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 NMRK2Q9NPI5 230 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 NLE1Q9NVX2 485 aaPredicted RBP10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 MARCH5Q9NX47 278 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 CROCCQ5TZA2 2017 aa10.33□□□□□ -0.76
CLSTN1-203ENST00000435891 IQCF5A8MTL0 148 aa10.32□□□□□ -0.76
CLSTN1-203ENST00000435891 F5H5T6 163 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms