RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 INTS7Q9NVH2 962 aaKnown RBP7.42□□□□□ -1.22
CPSF6-202ENST00000435070 G3V2T6 193 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 INO80B-WBP1J3KQ70 363 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 NDST3O95803 873 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 ATP5F1P24539 256 aaPredicted RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 BCL7AQ4VC05 210 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 WDR49Q8IV35 697 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 FAM86B1Q8N7N1 296 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 PIK3R3Q92569 461 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 SNAPC3Q92966 411 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 HOPXQ9BPY8 73 aaPredicted RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 CLPBQ9H078 707 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 RUBCNLQ9H714 662 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 AMBNQ9NP70 447 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 H3BUI4 141 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 TSC22D2O75157 780 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 PRKD3O94806 890 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 MT-ND2P03891 347 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 ALPLP05186 524 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 GPX3P22352 226 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 S100A5P33763 92 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 CDC20Q12834 499 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 TAB1Q15750 504 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 PAGE3Q5JUK9 113 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 TRIM48Q8IWZ4 208 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 IL17RDQ8NFM7 739 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 C19orf60Q96EN9 201 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 RHOBTB2Q9BYZ6 727 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 QPCTLQ9NXS2 382 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 BTBD3Q9Y2F9 522 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 ADGRA2Q96PE1 1338 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 COL24A1Q17RW2 1714 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 NUP205Q92621 2012 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 TTC24A2A3L6 582 aaPredicted RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 MITFO75030 526 aaPredicted RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 GOT2P00505 430 aaKnown RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 CXCL8P10145 99 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 ZNF37AP17032 561 aaPredicted RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 UQCRC1P31930 480 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 SFNP31947 248 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 NDST1P52848 882 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 RAB10P61026 200 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 CHRNB3Q05901 458 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 PGM5Q15124 567 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 GOLGA7BQ2TAP0 167 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 ZNF404Q494X3 552 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 TPRG1LQ5T0D9 272 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 MIER2Q8N344 545 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 APPL2Q8NEU8 664 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 GPR22Q99680 433 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 RHOJQ9H4E5 214 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 FAM8A1Q9UBU6 413 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 SLC12A8A0AV02 714 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 A8MT66 165 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 DFFAO00273 331 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 UBFD1O14562 309 aaKnown RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 PRMT5O14744 637 aaPredicted RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 SIX3O95343 332 aaPredicted RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 OR3A3P47888 321 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 MTPNP58546 118 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 LAIR2Q6ISS4 152 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 EFL1Q7Z2Z2 1120 aaKnown RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 ITFG1Q8TB96 612 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 UBASH3BQ8TF42 649 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 EMID1Q96A84 441 aaPredicted RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 ROPN1LQ96C74 230 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 GINS4Q9BRT9 223 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 RNF19AQ9NV58 838 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 NUFIP1Q9UHK0 495 aaKnown RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 CITO14578 2027 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 A0A087WZ62 844 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 A0A0X1KG70 313 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 EVPLLA8MZ36 301 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 SEMA3DO95025 777 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 DALRD3Q5D0E6 543 aaKnown RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 RBM20Q5T481 1227 aaKnown RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 ZNF470Q6ECI4 717 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 PRR5LQ6MZQ0 368 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 NRARPQ7Z6K4 114 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 MFSD6LQ8IWD5 586 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 LSMEM1Q8N8F7 131 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 NARFLQ9H6Q4 476 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 ALG9Q9H6U8 611 aa7.41□□□□□ -1.22
CPSF6-202ENST00000435070 RANGRFQ9HD47 186 aaPredicted RBP7.41□□□□□ -1.22
CPSF6-202ENST00000435070 A8MUA0 341 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 TARM1B6A8C7 271 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 PIP5K1BO14986 540 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 CST1P01037 141 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 HSD17B1P14061 328 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 ATF4P18848 351 aaPredicted RBP7.4□□□□□ -1.22
CPSF6-202ENST00000435070 HTR3AP46098 478 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 NFE2Q16621 373 aaPredicted RBP7.4□□□□□ -1.22
CPSF6-202ENST00000435070 NAPEPLDQ6IQ20 393 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 ZNF544Q6NX49 715 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 SZRD1Q7Z422 152 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 ACOT1Q86TX2 421 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 TMEM135Q86UB9 458 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 PARP16Q8N5Y8 322 aa7.4□□□□□ -1.22
CPSF6-202ENST00000435070 DCBLD1Q8N8Z6 715 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms