RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 MCMBPQ9BTE3 642 aa7.66□□□□□ -1.18
CNKSR3-202ENST00000433165 MTMR12Q9C0I1 747 aa7.66□□□□□ -1.18
CNKSR3-202ENST00000433165 CDT1Q9H211 546 aa7.66□□□□□ -1.18
CNKSR3-202ENST00000433165 DHX35Q9H5Z1 703 aaKnown RBP7.66□□□□□ -1.18
CNKSR3-202ENST00000433165 MRM3Q9HC36 420 aaKnown RBP7.66□□□□□ -1.18
CNKSR3-202ENST00000433165 PCDH12Q9NPG4 1184 aa7.66□□□□□ -1.18
CNKSR3-202ENST00000433165 INTS10Q9NVR2 710 aaKnown RBP7.66□□□□□ -1.18
CNKSR3-202ENST00000433165 CLEC1BQ9P126 229 aa7.66□□□□□ -1.18
CNKSR3-202ENST00000433165 ACTR3BQ9P1U1 418 aa7.66□□□□□ -1.18
CNKSR3-202ENST00000433165 ZNF229Q9UJW7 825 aa7.66□□□□□ -1.18
CNKSR3-202ENST00000433165 EIF3LQ9Y262 564 aaKnown RBP7.66□□□□□ -1.18
CNKSR3-202ENST00000433165 HCFC2Q9Y5Z7 792 aa7.66□□□□□ -1.18
CNKSR3-202ENST00000433165 PRRC2BQ5JSZ5 2229 aaKnown RBP7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 MN1Q10571 1320 aaPredicted RBP7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 ZFC3H1O60293 1989 aaKnown RBP7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 C2CD4BA6NLJ0 364 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 MEIS3P2A8K0S8 358 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 HIDE1A8MVS5 230 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 NT5C1B-RDH14C9J2C7 533 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 NME4O00746 187 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 SNPHO15079 494 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 LINC01565O15544 149 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 MED7O43513 233 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 NPHS1O60500 1241 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 POLBP06746 335 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 HTR1AP08908 422 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 POU2F2P09086 479 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 CDH1P12830 882 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 HDCP19113 662 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 CYP3A5P20815 502 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 OXTRP30559 389 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 SHMT2P34897 504 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 EIF2DP41214 584 aaKnown RBP7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 CASP3P42574 277 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 PPP5CP53041 499 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 CSE1LP55060 971 aaKnown RBP7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 STX1BP61266 288 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 ECT2LQ008S8 904 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 CCDC58Q4VC31 144 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 AGKQ53H12 422 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 RAB6CQ53S08 254 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 BOLA3Q53S33 107 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 XKR4Q5GH76 650 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 WDR45BQ5MNZ6 344 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 TRNP1Q6NT89 227 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 RNF19BQ6ZMZ0 732 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 RFPL4BQ6ZWI9 263 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 PIGZQ86VD9 579 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 NT5DC4Q86YG4 428 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 LSM14AQ8ND56 463 aaKnown RBP7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 ANGPTL6Q8NI99 470 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 SLC22A17Q8WUG5 538 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 LRRN4Q8WUT4 740 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 HDAC2Q92769 488 aaKnown RBP7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 VPS33AQ96AX1 596 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 ZFP42Q96MM3 310 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 SNX18Q96RF0 628 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 TTPALQ9BTX7 342 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 BTBD2Q9BX70 525 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 RAB6CQ9H0N0 254 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 RNF39Q9H2S5 420 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 SNX25Q9H3E2 840 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 PTPRHQ9HD43 1115 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 NECTIN3Q9NQS3 549 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 MARCH5Q9NX47 278 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 SYBUQ9NX95 663 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 GMPR2Q9P2T1 348 aaKnown RBP7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 HCSTQ9UBK5 93 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 AP4E1Q9UPM8 1137 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 ANKRD6Q9Y2G4 727 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 DERAQ9Y315 318 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 NAALAD2Q9Y3Q0 740 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 ANGPTL3Q9Y5C1 460 aa7.65□□□□□ -1.18
CNKSR3-202ENST00000433165 A0A0A0MRY4 1105 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 C16orf96A6NNT2 1141 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 SYN3O14994 580 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 PER2O15055 1255 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 TIMM44O43615 452 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 GPC4O75487 556 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 KCNK2O95069 426 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 CRYZL1O95825 349 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 GLP2RO95838 553 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 ALBP02768 609 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 GFAPP14136 432 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 ITIH1P19827 911 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 PBX3P40426 434 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 SERPINB10P48595 397 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 NR2C2P49116 596 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 ATP4BP51164 291 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 SESN2P58004 480 aaPredicted RBP7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 DGUOKQ16854 277 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 SPATS1Q496A3 300 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 TMEM31Q5JXX7 168 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 PMF1Q6P1K2 205 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 ANKS3Q6ZW76 656 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 STRA8Q7Z7C7 330 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 APPL2Q8NEU8 664 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 VN1R2Q8NFZ6 395 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 RHOXF1Q8NHV9 184 aa7.64□□□□□ -1.19
CNKSR3-202ENST00000433165 SUN5Q8TC36 379 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms