RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 DDHD1Q8NEL9 900 aa17.81■□□□□ 0.44
HERC3-205ENST00000426683 OR6C4Q8NGE1 309 aa17.81■□□□□ 0.44
HERC3-205ENST00000426683 CCDC74AQ96AQ1 378 aa17.81■□□□□ 0.44
HERC3-205ENST00000426683 TTC25Q96NG3 672 aa17.81■□□□□ 0.44
HERC3-205ENST00000426683 C19orf43Q9BQ61 176 aa17.81■□□□□ 0.44
HERC3-205ENST00000426683 CCDC3Q9BQI4 270 aa17.81■□□□□ 0.44
HERC3-205ENST00000426683 ASB8Q9H765 288 aa17.81■□□□□ 0.44
HERC3-205ENST00000426683 CASS4Q9NQ75 786 aa17.81■□□□□ 0.44
HERC3-205ENST00000426683 KCNK6Q9Y257 313 aa17.81■□□□□ 0.44
HERC3-205ENST00000426683 GOLGA6L10A0A0M3HER8 536 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 ECEL1O95672 775 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 MT-CO3P00414 261 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 KRT14P02533 472 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 GLB1P16278 677 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 COILP38432 576 aaPredicted RBP17.8■□□□□ 0.44
HERC3-205ENST00000426683 VPS41P49754 854 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 MAZP56270 477 aaKnown RBP17.8■□□□□ 0.44
HERC3-205ENST00000426683 NFATC2Q13469 925 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 PLA2G4EQ3MJ16 856 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 CCDC38Q502W7 563 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 CERCAMQ5T4B2 595 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 CCDC137Q6PK04 289 aaKnown RBP17.8■□□□□ 0.44
HERC3-205ENST00000426683 LRRTM4Q86VH4 590 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 NAGSQ8N159 534 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 STYXQ8WUJ0 223 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 PATE1Q8WXA2 126 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 NAPGQ99747 312 aaPredicted RBP17.8■□□□□ 0.44
HERC3-205ENST00000426683 ZCCHC2Q9C0B9 1178 aaKnown RBP17.8■□□□□ 0.44
HERC3-205ENST00000426683 EIF2B3Q9NR50 452 aaKnown RBP17.8■□□□□ 0.44
HERC3-205ENST00000426683 NLE1Q9NVX2 485 aaPredicted RBP17.8■□□□□ 0.44
HERC3-205ENST00000426683 RABGEF1Q9UJ41 708 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 CLCA2Q9UQC9 943 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 RNF215Q9Y6U7 377 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 SPEGQ15772 3267 aa17.8■□□□□ 0.44
HERC3-205ENST00000426683 CCDC78A2IDD5 438 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 KMOO15229 486 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 PHF2O75151 1096 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 ITGALP20701 1170 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 MC4RP32245 332 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 TARDBPQ13148 414 aaKnown RBP eCLIP17.79■□□□□ 0.44
HERC3-205ENST00000426683 INSCQ1MX18 579 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 CDCP2Q5VXM1 449 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 PAPD7Q5XG87 772 aaKnown RBP17.79■□□□□ 0.44
HERC3-205ENST00000426683 C17orf82Q86X59 251 aaPredicted RBP17.79■□□□□ 0.44
HERC3-205ENST00000426683 TRAPPC5Q8IUR0 188 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 ZNF547Q8IVP9 402 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 ARL14Q8N4G2 192 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 RASGEF1AQ8N9B8 481 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 GATA6Q92908 595 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 CNTNAP3BQ96NU0 1288 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 TMEM121BQ9BXQ6 578 aaPredicted RBP17.79■□□□□ 0.44
HERC3-205ENST00000426683 CNTNAP3Q9BZ76 1288 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 FAM96AQ9H5X1 160 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 SYNDIG1Q9H7V2 258 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 KLC4Q9NSK0 619 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 LRIT1Q9P2V4 623 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 CRLS1Q9UJA2 301 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 SLC30A1Q9Y6M5 507 aa17.79■□□□□ 0.44
HERC3-205ENST00000426683 CTAGE9A4FU28 777 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 MROH6A6NGR9 719 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 C1QTNF9BB2RNN3 333 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 H7C0S8 307 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 CASC3O15234 703 aaKnown RBP17.78■□□□□ 0.44
HERC3-205ENST00000426683 NUDT21O43809 227 aaKnown RBP17.78■□□□□ 0.44
HERC3-205ENST00000426683 SNX2O60749 519 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 EML2O95834 649 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 C1QTNF9P0C862 333 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 MSH3P20585 1137 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 AKT1P31749 480 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 TERF1P54274 439 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 GPS1Q13098 491 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 BIRC2Q13490 618 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 UNQ6494/PRO21346Q6UXR6 183 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 MICALCLQ6ZW33 695 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 SNX20Q7Z614 316 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 CACTIN-AS1Q8N1I8 211 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 C17orf53Q8N3J3 647 aaPredicted RBP17.78■□□□□ 0.44
HERC3-205ENST00000426683 DCBLD1Q8N8Z6 715 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 ULK4Q96C45 1275 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 CDKN2AIPNLQ96HQ2 116 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 CAPZA3Q96KX2 299 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 RANBP9Q96S59 729 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 OSGEPL1Q9H4B0 414 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 TBC1D29Q9UFV1 150 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 SLC23A2Q9UGH3 650 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 DNAJC16Q9Y2G8 782 aa17.78■□□□□ 0.44
HERC3-205ENST00000426683 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.77■□□□□ 0.44
HERC3-205ENST00000426683 TRBV23OR9-2A0A075B6M9 112 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 HEATR9A2RTY3 570 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 AGAP14A8MT82 685 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 PNLIPP16233 465 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 ZNF7P17097 686 aaPredicted RBP17.77■□□□□ 0.44
HERC3-205ENST00000426683 TPSB2P20231 275 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 ADRA1DP25100 572 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 FNTAP49354 379 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 CLCNKAP51800 687 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 CTSCP53634 463 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 CAMK2BQ13554 666 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 LAMB3Q13751 1172 aa17.77■□□□□ 0.44
HERC3-205ENST00000426683 TPSAB1Q15661 275 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms