RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 MPOP05164 745 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 ZSCAN5DPP0CG00 497 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 GLB1P16278 677 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 TPH1P17752 444 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 LRP8Q14114 963 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 SPIDRQ14159 915 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 TAF1AQ15573 450 aaPredicted RBP13.46□□□□□ -0.25
SNX3-204ENST00000426155 ISXQ2M1V0 245 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 RBM44Q6ZP01 1051 aaKnown RBP13.46□□□□□ -0.25
SNX3-204ENST00000426155 TMPRSS9Q7Z410 1059 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 SPRED1Q7Z699 444 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 ZNF761Q86XN6 746 aaPredicted RBP13.46□□□□□ -0.25
SNX3-204ENST00000426155 ZNF547Q8IVP9 402 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 REXO1L1PQ8IX06 675 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 GDAP1Q8TB36 358 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 SLC37A2Q8TED4 501 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 CCDC97Q96F63 343 aaPredicted RBP13.46□□□□□ -0.25
SNX3-204ENST00000426155 VPS35Q96QK1 796 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 FOXP3Q9BZS1 431 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 TRIM39Q9HCM9 518 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.46□□□□□ -0.253e-9■■■■□ 25.5
SNX3-204ENST00000426155 TBC1D29Q9UFV1 150 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 ZNF148Q9UQR1 794 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 RAXQ9Y2V3 346 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 PKP3Q9Y446 797 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 ENTPD2Q9Y5L3 495 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 AK5Q9Y6K8 562 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 DSPP15924 2871 aaKnown RBP13.46□□□□□ -0.25
SNX3-204ENST00000426155 CCDC78A2IDD5 438 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 D6RAR5 112 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 PPM1DO15297 605 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 NUDT21O43809 227 aaKnown RBP13.45□□□□□ -0.26
SNX3-204ENST00000426155 CEP104O60308 925 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 BRINP1O60477 761 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 SNX2O60749 519 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 KRT37O76014 449 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 PRAMEF1O95521 474 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 AP2A1O95782 977 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 LPOP22079 712 aaPredicted RBP13.45□□□□□ -0.26
SNX3-204ENST00000426155 ZNF140P52738 457 aaPredicted RBP13.45□□□□□ -0.26
SNX3-204ENST00000426155 OR1D5P58170 312 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 POU6F1Q14863 301 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 INSCQ1MX18 579 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 P3H1Q32P28 736 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 C3orf38Q5JPI3 329 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 GPRC6AQ5T6X5 926 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 CACTIN-AS1Q8N1I8 211 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 GFM1Q96RP9 751 aaKnown RBP13.45□□□□□ -0.26
SNX3-204ENST00000426155 LRRN3Q9H3W5 708 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 OSGEPL1Q9H4B0 414 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 LRRC40Q9H9A6 602 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 RMI1Q9H9A7 625 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 ETNK1Q9HBU6 452 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 PRDM8Q9NQV8 689 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 KLC4Q9NSK0 619 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 TRMT1Q9NXH9 659 aaKnown RBP13.45□□□□□ -0.26
SNX3-204ENST00000426155 SMARCAL1Q9NZC9 954 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 APPL1Q9UKG1 709 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 DNAJC16Q9Y2G8 782 aa13.45□□□□□ -0.26
SNX3-204ENST00000426155 A6NCN8 305 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 C2orf81A6NN90 581 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 RHPN2P1A8MT19 583 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 CHUKO15111 745 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 LDB2O43679 373 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 TLX3O43711 291 aaPredicted RBP13.44□□□□□ -0.26
SNX3-204ENST00000426155 TCEA3O75764 348 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 ZNF189O75820 626 aaPredicted RBP13.44□□□□□ -0.26
SNX3-204ENST00000426155 CDK14O94921 469 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 PRSS56P0CW18 603 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 ALDH4A1P30038 563 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 GRIA1P42261 906 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 KCNJ1P48048 391 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 CTSCP53634 463 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 GABREP78334 506 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 XIAPP98170 497 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 B4GALNT1Q00973 533 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 TMEM115Q12893 351 aaPredicted RBP13.44□□□□□ -0.26
SNX3-204ENST00000426155 PEX6Q13608 980 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 SEPT6Q14141 434 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 RTP5Q14D33 572 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 SEPT7Q16181 437 aaKnown RBP13.44□□□□□ -0.26
SNX3-204ENST00000426155 AMZ1Q400G9 498 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 FOXR1Q6PIV2 292 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 C11orf96Q7Z7L8 435 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 LRRTM4Q86VH4 590 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 TRAPPC5Q8IUR0 188 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 SLC35F6Q8N357 371 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 RASGEF1AQ8N9B8 481 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 DDHD1Q8NEL9 900 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 OR6C4Q8NGE1 309 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 OR52K1Q8NGK4 314 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 BRSK1Q8TDC3 778 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 MS4A14Q96JA4 679 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 DNAJC1Q96KC8 554 aaKnown RBP13.44□□□□□ -0.26
SNX3-204ENST00000426155 PPP1R2P1Q96PQ5 205 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 FRMD8P1Q9BZ68 369 aaPredicted RBP13.44□□□□□ -0.26
SNX3-204ENST00000426155 NRSN2Q9GZP1 204 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 FAM96AQ9H5X1 160 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 RDH14Q9HBH5 336 aa13.44□□□□□ -0.26
SNX3-204ENST00000426155 ARNT2Q9HBZ2 717 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms