RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 FBXO17Q96EF6 278 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 RNF145Q96MT1 663 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 CMTM3Q96MX0 182 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 CATSPERBQ9H7T0 1116 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 SMURF2Q9HAU4 748 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 PRMT8Q9NR22 394 aaPredicted RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 COL20A1Q9P218 1284 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 EIF3KQ9UBQ5 218 aaKnown RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 PCDHGB6Q9Y5F9 930 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 CDY2AQ9Y6F7 541 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 SPATA31A6Q5VVP1 1343 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 CCDC154A6NI56 674 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 HACD1B0YJ81 288 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 TRIM38O00635 465 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 KPNA5O15131 536 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 TREHO43280 583 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 PCDHGA12O60330 932 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 HPGDSO60760 199 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 SLC22A5O76082 557 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 APOC1P02654 83 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 APRTP07741 180 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 HLA-FP30511 346 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 AXLP30530 894 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 CTNNB1P35222 781 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 YBX1P67809 324 aaKnown RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 NKX3-2P78367 333 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 FOXO4P98177 505 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 CDC20Q12834 499 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 KNOP1Q1ED39 458 aaKnown RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 TREML2Q5T2D2 321 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 RETSATQ6NUM9 610 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 ATRAIDQ6UW56 229 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 SCIMPQ6UWF3 145 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 SLC26A11Q86WA9 606 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 CIR1Q86X95 450 aaPredicted RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 SPATA6LQ8N4H0 392 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 BOLLQ8N9W6 283 aaKnown RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 DEPDC1BQ8WUY9 529 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 EXOSC8Q96B26 276 aaKnown RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 NODALQ96S42 347 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 NAP1L4Q99733 375 aaKnown RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 SH2D3AQ9BRG2 576 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 ZNF518BQ9C0D4 1074 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 RACGAP1Q9H0H5 632 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 ESRP2Q9H6T0 727 aaKnown RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 UNKLQ9H9P5 680 aaKnown RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 ZFP14Q9HCL3 533 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 TMX2Q9Y320 296 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 ZNF804BA4D1E1 1349 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 DHRS12A0PJE2 317 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 ASB14A6NK59 587 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 EFCAB9A8MZ26 197 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 EML1O00423 815 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 LIASO43766 372 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 PMPCBO75439 489 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 RFPL1O75677 317 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 WDR47O94967 919 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 PTTG1O95997 202 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 FGF3P11487 239 aaPredicted RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 IL10P22301 178 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 HIBADHP31937 336 aaKnown RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 ICAM3P32942 547 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 CD68P34810 354 aaPredicted RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 MEOX2P50222 304 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 ATXN1P54253 815 aaKnown RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 EPHA5P54756 1037 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 IL5RAQ01344 420 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 CREB5Q02930 508 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 NFX1Q12986 1120 aaKnown RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 MORF4L2Q15014 288 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 ZNF404Q494X3 552 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 NAPRTQ6XQN6 538 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 RASAL3Q86YV0 1011 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 PGAM4Q8N0Y7 254 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 RELTQ969Z4 430 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 ARMC5Q96C12 935 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 KCNA7Q96RP8 456 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 PI4K2AQ9BTU6 479 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 ZCCHC4Q9H5U6 513 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 RASSF1Q9NS23 344 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 PRPF19Q9UMS4 504 aaKnown RBP6.81□□□□□ -1.32
CNOT4-205ENST00000423368 ABCG2Q9UNQ0 655 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 SORCS3Q9UPU3 1222 aa6.81□□□□□ -1.32
CNOT4-205ENST00000423368 RTL9Q8NET4 1388 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 FRMPD2Q68DX3 1309 aaPredicted RBP6.8□□□□□ -1.32
CNOT4-205ENST00000423368 ZFYVE16Q7Z3T8 1539 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 AGAP5A6NIR3 686 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SLC30A4O14863 429 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 HUS1O60921 280 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 ADAM11O75078 769 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 SNNO75324 88 aaPredicted RBP6.8□□□□□ -1.32
CNOT4-205ENST00000423368 IL33O95760 270 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 PRKCGP05129 697 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 ATP5BP06576 529 aaKnown RBP6.8□□□□□ -1.32
CNOT4-205ENST00000423368 KLK3P07288 261 aaPredicted RBP6.8□□□□□ -1.32
CNOT4-205ENST00000423368 NR3C2P08235 984 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 HTR1AP08908 422 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 CYP11B1P15538 503 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 CD36P16671 472 aa6.8□□□□□ -1.32
CNOT4-205ENST00000423368 PTAFRP25105 342 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms