RNA–Protein interactions for RNA: ENST00000423108.5

RPUSD3-203, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-203ENST00000423108 RASGEF1AQ8N9B8 481 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 OR13H1Q8NG92 308 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 CDKL2Q92772 493 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 FOXJ1Q92949 421 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.5□□□□□ -0.417e-6■■■■■ 27.5
RPUSD3-203ENST00000423108 ZC3H10Q96K80 434 aaKnown RBP12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 BIRC8Q96P09 236 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 PAFAH2Q99487 392 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 COPS8Q99627 209 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 TMEM109Q9BVC6 243 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 MIR1-1HGQ9H1L0 117 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 P2RY12Q9H244 342 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 WDR26Q9H7D7 661 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 ATXN10Q9UBB4 475 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 CRYL1Q9Y2S2 319 aa12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 MTO1Q9Y2Z2 717 aaKnown RBP12.5□□□□□ -0.41
RPUSD3-203ENST00000423108 PLXNB3Q9ULL4 1909 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 ZNF106Q9H2Y7 1883 aaKnown RBP12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 TMEM202A6NGA9 273 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 SMIM23A6NLE4 172 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 FOXO6A8MYZ6 492 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 AGPSO00116 658 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 MAP2K7O14733 419 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 CEACAM5P06731 702 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 PYGLP06737 847 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 HOXC4P09017 264 aaPredicted RBP12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 ZNF8P17098 575 aaPredicted RBP12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 FMO4P31512 558 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 CNR2P34972 360 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 GP5P40197 560 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 MSH2P43246 934 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 TTPAP49638 278 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 NUBP1P53384 320 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 PGGT1BP53609 377 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 CTSCP53634 463 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 TIAL1Q01085 375 aaKnown RBP eCLIP12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 ZNF844Q08AG5 666 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 TMEM115Q12893 351 aaPredicted RBP12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 ITIH4Q14624 930 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 AARS2Q5JTZ9 985 aaKnown RBP12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 CTSL3PQ5NE16 218 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 LDLRAP1Q5SW96 308 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 RBM20Q5T481 1227 aaKnown RBP12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 GRTP1Q5TC63 336 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 LYPLAL1Q5VWZ2 237 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 DOK6Q6PKX4 331 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 ADGRD1Q6QNK2 874 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 KYAT3Q6YP21 454 aaKnown RBP12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 CEP68Q76N32 757 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 DET1Q7L5Y6 550 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 GALNT7Q86SF2 657 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 GDAP1Q8TB36 358 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 LKAAEAR1Q8TD35 194 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 SCG3Q8WXD2 468 aaKnown RBP12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 SGF29Q96ES7 293 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 CPNE1Q99829 537 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 CCDC77Q9BR77 488 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 OR2AG1Q9H205 316 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 TRIM39Q9HCM9 518 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 TM9SF3Q9HD45 589 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 PHPT1Q9NRX4 125 aaPredicted RBP12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 TMEM74BQ9NUR3 256 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 INTS10Q9NVR2 710 aaKnown RBP12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 EURLQ9NYK6 297 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 GALPQ9UBC7 116 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 CTNNAL1Q9UBT7 734 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 PNMA8BQ9ULN7 279 aaPredicted RBP12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 MED16Q9Y2X0 877 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 PCDHGA2Q9Y5H1 932 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 R4GN57 208 aa12.49□□□□□ -0.41
RPUSD3-203ENST00000423108 ATXN2Q99700 1313 aaKnown RBP12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 TLDC2A0PJX2 215 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 IQCF5A8MTL0 148 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 DYNC1I1O14576 645 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 PRMT5O14744 637 aaPredicted RBP12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 MYCLP1P12525 358 aaPredicted RBP12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 ATP1B2P14415 290 aaPredicted RBP12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 RPS3P23396 243 aaKnown RBP eCLIP12.48□□□□□ -0.417e-7■■■■□ 25.3
RPUSD3-203ENST00000423108 CD151P48509 253 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 CSE1LP55060 971 aaKnown RBP12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 EIF3BP55884 814 aaKnown RBP12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 KIAA1024LP59773 190 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 BMPR2Q13873 1038 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 SIM2Q14190 667 aaPredicted RBP12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 NFATC4Q14934 902 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 WDR45BQ5MNZ6 344 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 LYSMD4Q5XG99 296 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 LRIG3Q6UXM1 1119 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 HDXQ7Z353 690 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 C11orf74Q86VG3 221 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 SPATS2Q86XZ4 545 aaKnown RBP12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 PHYKPLQ8IUZ5 450 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 RGL4Q8IZJ4 473 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 RBFAQ8N0V3 343 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 SLC22A18ASQ8N1D0 253 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 PRSS33Q8NF86 280 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 ATXN7L3BQ96GX2 97 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 VPS39Q96JC1 886 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 NDNQ99608 321 aa12.48□□□□□ -0.41
RPUSD3-203ENST00000423108 RBBP8Q99708 897 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms