RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ZNF711Q9Y462 761 aa17.15■□□□□ 0.34
MSH6-203ENST00000420813 HEMK1Q9Y5R4 338 aaPredicted RBP17.15■□□□□ 0.34
MSH6-203ENST00000420813 RAD1O60671 282 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 SNX2O60749 519 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 KRT1P04264 644 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 FAM87AP0C7U9 286 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 UBE2IP63279 158 aaKnown RBP17.14■□□□□ 0.33
MSH6-203ENST00000420813 CYP4F2P78329 520 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 TCEAL1Q15170 157 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 ODF2Q5BJF6 829 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 ALS2CLQ60I27 953 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 ANKS6Q68DC2 871 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 NPNTQ6UXI9 565 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 CEACAM20Q6UY09 585 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 ADGRG6Q86SQ4 1221 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 RFX6Q8HWS3 928 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 RHOT1Q8IXI2 618 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 RTP4Q96DX8 246 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 CHP1Q99653 195 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 GPR63Q9BZJ6 419 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 NHEJ1Q9H9Q4 299 aaPredicted RBP17.14■□□□□ 0.33
MSH6-203ENST00000420813 PILRAQ9UKJ1 303 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 SHOC2Q9UQ13 582 aa17.14■□□□□ 0.33
MSH6-203ENST00000420813 MN1Q10571 1320 aaPredicted RBP17.14■□□□□ 0.33
MSH6-203ENST00000420813 A8MU76 341 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 KMOO15229 486 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 CAPN5O15484 640 aaPredicted RBP17.13■□□□□ 0.33
MSH6-203ENST00000420813 VEGFDO43915 354 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 MFAP3LO75121 409 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 NDST3O95803 873 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 PIRTP0C851 137 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 LIFP15018 202 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 XRCC1P18887 633 aaPredicted RBP17.13■□□□□ 0.33
MSH6-203ENST00000420813 PCSK7Q16549 785 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 TEX44Q53QW1 395 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 SNAP47Q5SQN1 464 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 CCDC70Q6NSX1 233 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 BZW1Q7L1Q6 419 aaKnown RBP17.13■□□□□ 0.33
MSH6-203ENST00000420813 PRICKLE2Q7Z3G6 844 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 KDELC2Q7Z4H8 507 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 PLXDC1Q8IUK5 500 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 VSTM4Q8IW00 320 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 PLEKHG4BQ96PX9 1271 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 TIMM29Q9BSF4 260 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 SPRY4Q9C004 299 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 ADNPQ9H2P0 1102 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 GLOD4Q9HC38 313 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 PRDM8Q9NQV8 689 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 KLC4Q9NSK0 619 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 SPTLC3Q9NUV7 552 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 INTUQ9ULD6 942 aa17.13■□□□□ 0.33
MSH6-203ENST00000420813 A0A0A6YYK5 440 aaPredicted RBP17.12■□□□□ 0.33
MSH6-203ENST00000420813 MT-CYBP00156 380 aaPredicted RBP17.12■□□□□ 0.33
MSH6-203ENST00000420813 ANKRD34CP0C6C1 535 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 BPIP17213 487 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 MAPK9P45984 424 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 NR2C2P49116 596 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 PRKD1Q15139 912 aaPredicted RBP17.12■□□□□ 0.33
MSH6-203ENST00000420813 LRRTM4Q86VH4 590 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 NLGN4XQ8N0W4 816 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 NLGN4YQ8NFZ3 816 aaPredicted RBP17.12■□□□□ 0.33
MSH6-203ENST00000420813 SPATA22Q8NHS9 363 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 RNF25Q96BH1 459 aaPredicted RBP17.12■□□□□ 0.33
MSH6-203ENST00000420813 TEKT5Q96M29 485 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 VPS35Q96QK1 796 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 TBC1D10AQ9BXI6 508 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 OSGEPL1Q9H4B0 414 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 CLMPQ9H6B4 373 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 ARFGAP3Q9NP61 516 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 GEMIN8Q9NWZ8 242 aaKnown RBP17.12■□□□□ 0.33
MSH6-203ENST00000420813 TMEM184BQ9Y519 407 aaPredicted RBP17.12■□□□□ 0.33
MSH6-203ENST00000420813 BSNQ9UPA5 3926 aa17.12■□□□□ 0.33
MSH6-203ENST00000420813 PRR19A6NJB7 356 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 ZNF891A8MT65 544 aaPredicted RBP17.11■□□□□ 0.33
MSH6-203ENST00000420813 PPFIA2O75334 1257 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 SLC4A1P02730 911 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 C9P02748 559 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 ZNF7P17097 686 aaPredicted RBP17.11■□□□□ 0.33
MSH6-203ENST00000420813 PTPN3P26045 913 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 MAP4P27816 1152 aaKnown RBP17.11■□□□□ 0.33
MSH6-203ENST00000420813 DYNLT1P63172 113 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 TFDP2Q14188 446 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 TAZQ16635 292 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 INSCQ1MX18 579 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 ZNF648Q5T619 568 aaPredicted RBP17.11■□□□□ 0.33
MSH6-203ENST00000420813 BORAQ6PGQ7 559 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 CRTC3Q6UUV7 619 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 MFSD7Q6UXD7 560 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 TMEM26Q6ZUK4 368 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 KIAA1143Q96AT1 154 aaPredicted RBP17.11■□□□□ 0.33
MSH6-203ENST00000420813 SLC45A3Q96JT2 553 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 CATSPER2Q96P56 530 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 EFHD1Q9BUP0 239 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 TRIT1Q9H3H1 467 aaKnown RBP17.11■□□□□ 0.33
MSH6-203ENST00000420813 SLC23A2Q9UGH3 650 aa17.11■□□□□ 0.33
MSH6-203ENST00000420813 TOX3O15405 576 aaPredicted RBP17.1■□□□□ 0.33
MSH6-203ENST00000420813 MTSS1O43312 755 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 SPOPO43791 374 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 PMPCBO75439 489 aa17.1■□□□□ 0.33
MSH6-203ENST00000420813 CDK14O94921 469 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms