RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CFAP47Q6ZTR5 3102 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 CHD6Q8TD26 2715 aa20.07■□□□□ 0.8
GTF3A-202ENST00000419181 A6NCN8 305 aa20.06■□□□□ 0.8
GTF3A-202ENST00000419181 C2orf81A6NN90 581 aa20.06■□□□□ 0.8
GTF3A-202ENST00000419181 RHPN2P1A8MT19 583 aa20.06■□□□□ 0.8
GTF3A-202ENST00000419181 GPR39O43194 453 aa20.06■□□□□ 0.8
GTF3A-202ENST00000419181 DXOO77932 396 aaKnown RBP20.06■□□□□ 0.8
GTF3A-202ENST00000419181 STIP1P31948 543 aaKnown RBP20.06■□□□□ 0.8
GTF3A-202ENST00000419181 CLCNKAP51800 687 aa20.06■□□□□ 0.8
GTF3A-202ENST00000419181 GABREP78334 506 aa20.06■□□□□ 0.8
GTF3A-202ENST00000419181 CRTC3Q6UUV7 619 aa20.06■□□□□ 0.8
GTF3A-202ENST00000419181 B3GNT8Q7Z7M8 397 aa20.06■□□□□ 0.8
GTF3A-202ENST00000419181 SLC37A2Q8TED4 501 aa20.06■□□□□ 0.8
GTF3A-202ENST00000419181 LRRC45Q96CN5 670 aa20.06■□□□□ 0.8
GTF3A-202ENST00000419181 LRRC40Q9H9A6 602 aa20.06■□□□□ 0.8
GTF3A-202ENST00000419181 SMOXQ9NWM0 555 aa20.06■□□□□ 0.8
GTF3A-202ENST00000419181 PPM1DO15297 605 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 B4GAT1O43505 415 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 UGT1A9O60656 530 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 CDK14O94921 469 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 UGT1A6P19224 532 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 UGT1A1P22309 533 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 UGT1A4P22310 534 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 CA5AP35218 305 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 UGT1A3P35503 534 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 UGT1A5P35504 534 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 GPR3P46089 330 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 FASLGP48023 281 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 ITGA9Q13797 1035 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 SIX1Q15475 284 aaPredicted RBP20.05■□□□□ 0.8
GTF3A-202ENST00000419181 TBC1D25Q3MII6 688 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 C3orf38Q5JPI3 329 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 LRRTM4Q86VH4 590 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 ZNF547Q8IVP9 402 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 DDHD1Q8NEL9 900 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 OR4K2Q8NGD2 314 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 C1orf54Q8WWF1 131 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 LIN37Q96GY3 246 aaPredicted RBP20.05■□□□□ 0.8
GTF3A-202ENST00000419181 C19orf43Q9BQ61 176 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 UGT1A7Q9HAW7 530 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 UGT1A10Q9HAW8 530 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 UGT1A8Q9HAW9 530 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 RALYQ9UKM9 306 aaKnown RBP20.05■□□□□ 0.8
GTF3A-202ENST00000419181 ATXN7L1Q9ULK2 861 aaPredicted RBP20.05■□□□□ 0.8
GTF3A-202ENST00000419181 SATB2Q9UPW6 733 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 KCTD3Q9Y597 815 aa20.05■□□□□ 0.8
GTF3A-202ENST00000419181 PRR19A6NJB7 356 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 KMOO15229 486 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 TLX3O43711 291 aaPredicted RBP20.04■□□□□ 0.8
GTF3A-202ENST00000419181 PRAMEF1O95521 474 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 CRTAMO95727 393 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 AP2A1O95782 977 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 CCKBRP32239 447 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 ZNF140P52738 457 aaPredicted RBP20.04■□□□□ 0.8
GTF3A-202ENST00000419181 OR1D5P58170 312 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 PDE1BQ01064 536 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 TMEM115Q12893 351 aaPredicted RBP20.04■□□□□ 0.8
GTF3A-202ENST00000419181 BIRC2Q13490 618 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 LDLRAP1Q5SW96 308 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 IYDQ6PHW0 289 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 IGF2-ASQ6U949 168 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 LSMEM2Q8N112 164 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 SNIP1Q8TAD8 396 aaKnown RBP20.04■□□□□ 0.8
GTF3A-202ENST00000419181 GDAP1Q8TB36 358 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 TIMM29Q9BSF4 260 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 FOXP3Q9BZS1 431 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 KLC4Q9NSK0 619 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 SLC23A2Q9UGH3 650 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 PCDHGA8Q9Y5G5 932 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 ZFHX4Q86UP3 3567 aa20.04■□□□□ 0.8
GTF3A-202ENST00000419181 ITPR1Q14643 2758 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 CCDC187A0A096LP49 1063 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 TMX2-CTNND1H3BSU7 103 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 PSMD3O43242 534 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 ZW10O43264 779 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 F3P13726 295 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 ZNF7P17097 686 aaPredicted RBP20.03■□□□□ 0.8
GTF3A-202ENST00000419181 ALDH4A1P30038 563 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 ACTN2P35609 894 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 INHBCP55103 352 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 ZFP36L1Q07352 338 aaKnown RBP20.03■□□□□ 0.8
GTF3A-202ENST00000419181 INSCQ1MX18 579 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 PLA2G4EQ3MJ16 856 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.03■□□□□ 0.8
GTF3A-202ENST00000419181 GPRC6AQ5T6X5 926 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 C19orf48Q6RUI8 117 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 TMPRSS9Q7Z410 1059 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 C11orf96Q7Z7L8 435 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 TAB3Q8N5C8 712 aaPredicted RBP20.03■□□□□ 0.8
GTF3A-202ENST00000419181 OR13C4Q8NGS5 318 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 WDR36Q8NI36 951 aaKnown RBP20.03■□□□□ 0.8
GTF3A-202ENST00000419181 FGF11Q92914 225 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 PRR11Q96HE9 360 aaPredicted RBP20.03■□□□□ 0.8
GTF3A-202ENST00000419181 TMEM74Q96NL1 305 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 ZCCHC2Q9C0B9 1178 aaKnown RBP20.03■□□□□ 0.8
GTF3A-202ENST00000419181 ASCL3Q9NQ33 180 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 FKBPLQ9UIM3 349 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 LHX6Q9UPM6 363 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 ZNF148Q9UQR1 794 aa20.03■□□□□ 0.8
GTF3A-202ENST00000419181 TRBV23OR9-2A0A075B6M9 112 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms