RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SPAM1P38567 509 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 GSDMDP57764 484 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 TLE3Q04726 772 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 ATP13A5Q4VNC0 1218 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.27■□□□□ 0.2
LINC00404-201ENST00000418660 IYDQ6PHW0 289 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 RANBP10Q6VN20 620 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 USP53Q70EK8 1073 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 KCNE4Q8WWG9 221 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 CCDC97Q96F63 343 aaPredicted RBP16.27■□□□□ 0.2
LINC00404-201ENST00000418660 CRELD1Q96HD1 420 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 NAF1Q96HR8 494 aaKnown RBP16.27■□□□□ 0.2
LINC00404-201ENST00000418660 HES6Q96HZ4 224 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 SPATA13Q96N96 652 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 PPP1R2P1Q96PQ5 205 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 FICDQ9BVA6 458 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 DPH1Q9BZG8 443 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 SEMA6CQ9H3T2 930 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 RDH14Q9HBH5 336 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 SARS2Q9NP81 518 aaKnown RBP16.27■□□□□ 0.2
LINC00404-201ENST00000418660 KCNK4Q9NYG8 393 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 TMPRSS11EQ9UL52 423 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 PKP3Q9Y446 797 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 LOXL2Q9Y4K0 774 aa16.27■□□□□ 0.2
LINC00404-201ENST00000418660 ARHGEF17Q96PE2 2063 aaPredicted RBP16.26■□□□□ 0.19
LINC00404-201ENST00000418660 IGHV1OR21-1A0A087WYE8 117 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 OR5K4A6NMS3 321 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 KMOO15229 486 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 SNX2O60749 519 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 PPFIA2O75334 1257 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 CDK14O94921 469 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 F3P13726 295 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 PSMB4P28070 264 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 ADRA1AP35348 466 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 PHF19Q5T6S3 580 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 ZNF574Q6ZN55 896 aaPredicted RBP16.26■□□□□ 0.19
LINC00404-201ENST00000418660 LRRTM4Q86VH4 590 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 CCDC110Q8TBZ0 833 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 BRSK1Q8TDC3 778 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 UBE2Q2Q8WVN8 375 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 SLC38A3Q99624 504 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 CMKLR1Q99788 373 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 DPYSL5Q9BPU6 564 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 NUDT22Q9BRQ3 303 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 TSGA10Q9BZW7 698 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 PRORYQ9H606 182 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 STN1Q9H668 368 aaKnown RBP16.26■□□□□ 0.19
LINC00404-201ENST00000418660 KLC4Q9NSK0 619 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 PCDHGA7Q9Y5G6 932 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 CAPN6Q9Y6Q1 641 aa16.26■□□□□ 0.19
LINC00404-201ENST00000418660 DSPP15924 2871 aaKnown RBP16.26■□□□□ 0.19
LINC00404-201ENST00000418660 KIR2DS5A0A0G2JLQ3 304 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 A0A0G2JNG1 304 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 GLYATL1P3A0A0U1RQE8 302 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 C5orf60A6NFR6 353 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 KIR2DS3K7RE56 304 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 STX7O15400 261 aaKnown RBP16.25■□□□□ 0.19
LINC00404-201ENST00000418660 BUD23O43709 281 aaKnown RBP16.25■□□□□ 0.19
LINC00404-201ENST00000418660 MTX2O75431 263 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 JMJD7P0C870 316 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 HGFP14210 728 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 ZNF7P17097 686 aaPredicted RBP16.25■□□□□ 0.19
LINC00404-201ENST00000418660 GPLD1P80108 840 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 HHEXQ03014 270 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 TMEM115Q12893 351 aaPredicted RBP16.25■□□□□ 0.19
LINC00404-201ENST00000418660 KLF1Q13351 362 aaPredicted RBP16.25■□□□□ 0.19
LINC00404-201ENST00000418660 KIR2DS5Q14953 304 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 TAF1AQ15573 450 aaPredicted RBP16.25■□□□□ 0.19
LINC00404-201ENST00000418660 CHRNA6Q15825 494 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 INSCQ1MX18 579 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 KHDC1Q4VXA5 237 aaKnown RBP16.25■□□□□ 0.19
LINC00404-201ENST00000418660 BROXQ5VW32 411 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 NKAIN2Q5VXU1 208 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 CRTC3Q6UUV7 619 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 GDAP1Q8TB36 358 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 SH3KBP1Q96B97 665 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 TIMM29Q9BSF4 260 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 AKAP7Q9P0M2 348 aaPredicted RBP16.25■□□□□ 0.19
LINC00404-201ENST00000418660 PISDQ9UG56 409 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 SLC23A2Q9UGH3 650 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 FAM208BQ5VWN6 2430 aa16.25■□□□□ 0.19
LINC00404-201ENST00000418660 CELSR3Q9NYQ7 3312 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 SCN8AQ9UQD0 1980 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 IGHV5-10-1A0A0J9YXX1 117 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 C2orf81A6NN90 581 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 KLK10O43240 276 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 KRT86O43790 486 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 UGT1A9O60656 530 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 HOXB3P14651 431 aaPredicted RBP16.24■□□□□ 0.19
LINC00404-201ENST00000418660 UGT1A6P19224 532 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 LPOP22079 712 aaPredicted RBP16.24■□□□□ 0.19
LINC00404-201ENST00000418660 UGT1A1P22309 533 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 UGT1A4P22310 534 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 UGT1A3P35503 534 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 LIMK2P53671 638 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 TRA2AQ13595 282 aaKnown RBP eCLIP16.24■□□□□ 0.19
LINC00404-201ENST00000418660 ITGA9Q13797 1035 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 GTF2H3Q13889 308 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 C16orf72Q14CZ0 275 aa16.24■□□□□ 0.19
LINC00404-201ENST00000418660 FAM151BQ6UXP7 276 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms