RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 HS3ST5Q8IZT8 346 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 RIN3Q8TB24 985 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 FIG4Q92562 907 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 SGCDQ92629 289 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 FUBP1Q96AE4 644 aaKnown RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 C12orf43Q96C57 262 aaKnown RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 ROPN1LQ96C74 230 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 MTFMTQ96DP5 389 aaKnown RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 PPP1R2P1Q96PQ5 205 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 TRIM15Q9C019 465 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 FBXO44Q9H4M3 255 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 ZFP14Q9HCL3 533 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 EXD2Q9NVH0 621 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 TRMT6Q9UJA5 497 aaKnown RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 DICER1Q9UPY3 1922 aaKnown RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 A0A1W2PPW3 197 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 SNAP91O60641 907 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 PAPSS2O95340 614 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 GJB5O95377 273 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 CHEK2O96017 543 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 DNAJB1P25685 340 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 CCND3P30281 292 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 HK3P52790 923 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 PIGFQ07326 219 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 PABPC1LQ4VXU2 614 aaKnown RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 SETMARQ53H47 684 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 PRSS55Q6UWB4 352 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 XKR5Q6UX68 686 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 RNF19BQ6ZMZ0 732 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 FRA10AC1Q70Z53 315 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 CCDC117Q8IWD4 279 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 PARP8Q8N3A8 854 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 METTL6Q8TCB7 284 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 TMEM125Q96AQ2 219 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 GPATCH1Q9BRR8 931 aaKnown RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 ANKRD60Q9BZ19 345 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 TM6SF2Q9BZW4 377 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 ADNPQ9H2P0 1102 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 RRAGCQ9HB90 399 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 ZFYVE28Q9HCC9 887 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 PLK2Q9NYY3 685 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 PCDHB8Q9UN66 801 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 POLR3HQ9Y535 204 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 NUP214P35658 2090 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 A0A0J9YVX5 310 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 SLC22A3O75751 556 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 HLA-DPA1P20036 260 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 HOXC8P31273 242 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 PMS2P3Q13401 168 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 BLOC1S3Q6QNY0 202 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 CLEC4FQ8N1N0 589 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 LRRC43Q8N309 656 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 ERLEC1Q96DZ1 483 aa11.79□□□□□ -0.52
LIMK1-202ENST00000418310 HOPXQ9BPY8 73 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 SDR39U1Q9NRG7 319 aaPredicted RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 OAS3Q9Y6K5 1087 aaKnown RBP11.79□□□□□ -0.52
LIMK1-202ENST00000418310 MAN1A2O60476 641 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 PRAMEF11O60813 436 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 KERAO60938 352 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ZNF623O75123 536 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 NDST3O95803 873 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 CAPN1P07384 714 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 IDO1P14902 403 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 VARSP26640 1264 aaKnown RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 FLT3LGP49771 235 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 POLR2JP52435 117 aaKnown RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 TPD52P55327 224 aaPredicted RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ATP6V0D1P61421 351 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 IL1RL1Q01638 556 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 DCTN2Q13561 401 aaKnown RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 SLC14A2Q15849 920 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 NANOGP8Q6NSW7 305 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 STK32CQ86UX6 486 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 GPSM1Q86YR5 675 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 DHRSXQ8N5I4 330 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 CLDN19Q8N6F1 224 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ANKFN1Q8N957 763 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ISOC1Q96CN7 298 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 C1orf74Q96LT6 269 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 CHID1Q9BWS9 393 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 NANOGQ9H9S0 305 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 SCUBE2Q9NQ36 999 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 TLR8Q9NR97 1041 aaKnown RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 AGPAT4Q9NRZ5 378 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ANAPC2Q9UJX6 822 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 GPR45Q9Y5Y3 372 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 MYO16Q9Y6X6 1858 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ATE1O95260 518 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ALPIP09923 528 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 BMP2P12643 396 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 OXCT1P55809 520 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 CRHR2Q13324 411 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 TRIP4Q15650 581 aaPredicted RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 SLC44A4Q53GD3 710 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 LETMD1Q6P1Q0 360 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 C8orf82Q6P1X6 216 aaPredicted RBP11.78□□□□□ -0.52
LIMK1-202ENST00000418310 LRRC49Q8IUZ0 686 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 ABI1Q8IZP0 508 aa11.78□□□□□ -0.52
LIMK1-202ENST00000418310 TOP1MTQ969P6 601 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms