RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SPATC1Q76KD6 591 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 CDAN1Q8IWY9 1227 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 TP53INP2Q8IXH6 220 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 UBQLNLQ8IYU4 475 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 CLYBLQ8N0X4 340 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 RNF139Q8WU17 664 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 RPL3LQ92901 407 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 PHF21BQ96EK2 531 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 TMEM74Q96NL1 305 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 KAT8Q9H7Z6 458 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 DBNDD1Q9H9R9 158 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 CHST12Q9NRB3 414 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 ERVK-18Q9QC07 812 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 GIMAP2Q9UG22 337 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 MOSPD1Q9UJG1 213 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 FZD10Q9ULW2 581 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 DNAJC15Q9Y5T4 150 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 ASPDHA6ND91 283 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 ZBTB24O43167 697 aaPredicted RBP7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 ZW10O43264 779 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 ATICP31939 592 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 DDOSTP39656 456 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 OR2B6P58173 313 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 CDK5R2Q13319 367 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 DGCR6Q14129 220 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 POU6F1Q14863 301 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 FUT11Q495W5 492 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 FAM98BQ52LJ0 330 aaKnown RBP7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 DACT2Q5SW24 774 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 NOL9Q5SY16 702 aaKnown RBP7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 SULT1C3Q6IMI6 304 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 KIAA1841Q6NSI8 718 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 SLC35F5Q8WV83 523 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 JPH3Q8WXH2 748 aaPredicted RBP7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 ST6GAL2Q96JF0 529 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 GAD1Q99259 594 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 NIFKQ9BYG3 293 aaKnown RBP7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 DUSP21Q9H596 190 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 FBXL12Q9NXK8 326 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 STMN3Q9NZ72 180 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 MAGEL2Q9UJ55 1249 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 A3GALT2U3KPV4 340 aa7.96□□□□□ -1.13
HMGXB4-202ENST00000418170 FAM25AB3EWG3 89 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM25CB3EWG5 89 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM25GB3EWG6 89 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 NOBOXO60393 691 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 APOA1P02647 267 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 PRKCBP05771 671 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 CXCL8P10145 99 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 PCNAP12004 261 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 TSPAN8P19075 237 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 PSMB9P28065 219 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 GGT5P36269 586 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 TGFBR1P36897 503 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 MASP1P48740 699 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 OR4D2P58180 307 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 DEFA1P59665 94 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 DEFA3P59666 94 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC35A2P78381 396 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 POU4F1Q01851 419 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 CDH17Q12864 832 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 TRAF3Q13114 568 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 IL18R1Q13478 541 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 RCAN2Q14206 197 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 FSCN1Q16658 493 aaKnown RBP7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 PPP1R26Q5T8A7 1209 aaPredicted RBP7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 STRIP1Q5VSL9 837 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 AGAP9Q5VTM2 703 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 GLYATQ6IB77 296 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 MPZL3Q6UWV2 235 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 NATD1Q8N6N6 113 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 RMDN1Q96DB5 314 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 GDF15Q99988 308 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 RBM4BQ9BQ04 359 aaKnown RBP7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 RBM4Q9BWF3 364 aaKnown RBP7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 NT5C1AQ9BXI3 368 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 DCSTAMPQ9H295 470 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 EPS8L2Q9H6S3 715 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 RUBCNLQ9H714 662 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 ZNF302Q9NR11 478 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 PNMA8BQ9ULN7 279 aaPredicted RBP7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 BOLA1Q9Y3E2 137 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 CITO14578 2027 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 SHROOM3Q8TF72 1996 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 CLDN24A6NM45 220 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 EFCAB9A8MZ26 197 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 EEF2KO00418 725 aaKnown RBP7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 CDK2AP1O14519 115 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 GAS2O43903 313 aaKnown RBP7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 SUPT7LO94864 414 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 PKLRP30613 574 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 NOS2P35228 1153 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC12A2P55011 1212 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 PRKCDQ05655 676 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 RPS6KA2Q15349 733 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 PLEKHG6Q3KR16 790 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 PAGE3Q5JUK9 113 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 ZNF772Q68DY9 489 aaPredicted RBP7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 ZNF280DQ6N043 979 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 ERAP2Q6P179 960 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms