RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 BANPQ8N9N5 519 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 FCRL2Q96LA5 508 aaPredicted RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 ZNF354BQ96LW1 612 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 GPR21Q99679 349 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 LPIN3Q9BQK8 851 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 A0A1W2PQH9 124 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 TGFB3P10600 412 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 HSPA7P48741 367 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 ULK3Q6PHR2 472 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 TMPRSS11BQ86T26 416 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 PARGQ86W56 976 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 CIR1Q86X95 450 aaPredicted RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 BSNDQ8WZ55 320 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 ZNF607Q96SK3 696 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 LGALS13Q9UHV8 139 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 OR10H1Q9Y4A9 318 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 GMEB1Q9Y692 573 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 DIP2BQ9P265 1576 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 EFCAB9A8MZ26 197 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 SMAD9O15198 467 aaKnown RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 CPNE3O75131 537 aaKnown RBP11.97□□□□□ -0.49
UBR4-205ENST00000417040 CDK18Q07002 472 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 UNC93AQ86WB7 457 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 HM13Q8TCT9 377 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 CXorf40AQ8TE69 158 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 CCDC28BQ9BUN5 200 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 TMEM106CQ9BVX2 250 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 UNC93B1Q9H1C4 597 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 DPEP3Q9H4B8 488 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 TAS2R1Q9NYW7 299 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 COMMD3Q9UBI1 195 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 PCDHB9Q9Y5E1 797 aa11.97□□□□□ -0.49
UBR4-205ENST00000417040 PPP1R11O60927 126 aaPredicted RBP11.96□□□□□ -0.49
UBR4-205ENST00000417040 FESP07332 822 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 TFPTP0C1Z6 253 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 CHRNB2P17787 502 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 IST1P53990 364 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 BNC1Q01954 994 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 CLCQ05315 142 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 LAPTM5Q13571 262 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 E2F2Q14209 437 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 TRMT10BQ6PF06 316 aaKnown RBP11.96□□□□□ -0.49
UBR4-205ENST00000417040 SLC51AQ86UW1 340 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 TMEM86AQ8N2M4 240 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 OR4K2Q8NGD2 314 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 AHCYL2Q96HN2 611 aaKnown RBP11.96□□□□□ -0.49
UBR4-205ENST00000417040 SPATA5L1Q9BVQ7 753 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 IGFLR1Q9H665 355 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 PNPLA8Q9NP80 782 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 TNFSF13BQ9Y275 285 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 H3BNX3 289 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 MATN2O00339 956 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 MAFO75444 373 aaPredicted RBP11.96□□□□□ -0.49
UBR4-205ENST00000417040 OR4F21O95013 312 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 ENPEPQ07075 957 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 GANABQ14697 944 aaKnown RBP11.96□□□□□ -0.49
UBR4-205ENST00000417040 PDPRQ8NCN5 879 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 TRPV3Q8NET8 790 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 QRFPRQ96P65 431 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 KCNC2Q96PR1 638 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 CDK15Q96Q40 435 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 TBX5Q99593 518 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 RACGAP1Q9H0H5 632 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 PREBQ9HCU5 417 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 C8orf4Q9NR00 106 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 VPS51Q9UID3 782 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 TRPV2Q9Y5S1 764 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 SQORQ9Y6N5 450 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 KDM4BO94953 1096 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 POLR2LP62875 67 aaKnown RBP11.96□□□□□ -0.49
UBR4-205ENST00000417040 DSC2Q02487 901 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 DCAF12L1Q5VU92 463 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 ZDHHC24Q6UX98 284 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 AGMOQ6ZNB7 445 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 ADAMTSL2Q86TH1 951 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 NT5DC4Q86YG4 428 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 HEXDCQ8WVB3 486 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 NXF3Q9H4D5 531 aaKnown RBP11.96□□□□□ -0.49
UBR4-205ENST00000417040 GLOD4Q9HC38 313 aa11.96□□□□□ -0.49
UBR4-205ENST00000417040 EI24O14681 340 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 LRCH4O75427 683 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 H6PDO95479 791 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 ITGB1P05556 798 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 HOXB8P17481 243 aaPredicted RBP11.96□□□□□ -0.5
UBR4-205ENST00000417040 SMIM11AP58511 58 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 ESRP1Q6NXG1 681 aaKnown RBP11.96□□□□□ -0.5
UBR4-205ENST00000417040 SLC9A9Q8IVB4 645 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 SLC39A3Q9BRY0 314 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 FAIM2Q9BWQ8 316 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 GPN1Q9HCN4 374 aaPredicted RBP11.96□□□□□ -0.5
UBR4-205ENST00000417040 SH3D21A4FU49 640 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 FABP12A6NFH5 140 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 H7C0S8 307 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 ACSL4O60488 711 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 SERPINB7O75635 380 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 MT-CYBP00156 380 aaPredicted RBP11.96□□□□□ -0.5
UBR4-205ENST00000417040 ATP6V0D1P61421 351 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 GTF2H2Q13888 395 aa11.96□□□□□ -0.5
UBR4-205ENST00000417040 ZNHIT3Q15649 155 aaPredicted RBP11.96□□□□□ -0.5
UBR4-205ENST00000417040 GTF2H2CQ6P1K8 395 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms