RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 POLR1EQ9GZS1 481 aaKnown RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 PIF1Q9H611 641 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 TLR9Q9NR96 1032 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 FLRT1Q9NZU1 646 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 TMEM9Q9P0T7 183 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 SLAMF8Q9P0V8 285 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 LEF1Q9UJU2 399 aaPredicted RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 ANAPC2Q9UJX6 822 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 PCDHB8Q9UN66 801 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 FADS3Q9Y5Q0 445 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 OAS3Q9Y6K5 1087 aaKnown RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 CCDC162PA2VCL2 907 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 K7EPI3 171 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 GIPC1O14908 333 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 ADAM23O75077 832 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 SOAT2O75908 522 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 MLYCDO95822 493 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 CHEK2O96017 543 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 CHRNA1P02708 482 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 SLC4A1P02730 911 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 RPS17P08708 135 aaKnown RBP9.72□□□□□ -0.85
CD44-206ENST00000415148 CD9P21926 228 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 ELK4P28324 431 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 EEF1DP29692 281 aaKnown RBP9.72□□□□□ -0.85
CD44-206ENST00000415148 MAGEA8P43361 318 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 GSK3BP49841 420 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 ECT2LQ008S8 904 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 RAD51Q06609 339 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 GRSF1Q12849 480 aaKnown RBP eCLIP9.72□□□□□ -0.85
CD44-206ENST00000415148 MTA1Q13330 715 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 SERINC3Q13530 473 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 ATP1A4Q13733 1029 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 ANKRD26P1Q6NSI1 321 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 USP51Q70EK9 711 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 TMEM199Q8N511 208 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 OSCP1Q8WVF1 389 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 PLEKHA8Q96JA3 519 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 C8orf48Q96LL4 319 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 TAS2R13Q9NYV9 303 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 PKD2L2Q9NZM6 624 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 ZIM2Q9NZV7 527 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 RNF112Q9ULX5 631 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 KCTD3Q9Y597 815 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 MAGED1Q9Y5V3 778 aaPredicted RBP9.72□□□□□ -0.85
CD44-206ENST00000415148 ANKRD36A6QL64 1941 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 A0A0U1RQF3 1178 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 ASPDHA6ND91 283 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 CCDC154A6NI56 674 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 IFRD1O00458 451 aaPredicted RBP9.72□□□□□ -0.85
CD44-206ENST00000415148 CRCPO75575 148 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 SLC22A3O75751 556 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 KCNH1O95259 989 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 ESRRBO95718 433 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 LDLRP01130 860 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 POMCP01189 267 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 PSMA3P25788 255 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 HMOX2P30519 316 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 RPS9P46781 194 aaKnown RBP9.72□□□□□ -0.85
CD44-206ENST00000415148 ZFP36L2P47974 494 aaKnown RBP9.72□□□□□ -0.85
CD44-206ENST00000415148 BMXP51813 675 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 ADARB1P78563 741 aaKnown RBP9.72□□□□□ -0.85
CD44-206ENST00000415148 GNA12Q03113 381 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 RELAQ04206 551 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 EMX2Q04743 252 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 YWHAHQ04917 246 aaPredicted RBP9.72□□□□□ -0.85
CD44-206ENST00000415148 LIPEQ05469 1076 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 MGAT3Q09327 533 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 POLD3Q15054 466 aaPredicted RBP9.72□□□□□ -0.85
CD44-206ENST00000415148 ALFQ53S48 1182 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 CYBRD1Q53TN4 286 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 XKR7Q5GH72 579 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 LDLRAP1Q5SW96 308 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 ALG1LQ6GMV1 187 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 DCDC5Q6ZRR9 648 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 FKBP9P1Q75LS8 142 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 BTLAQ7Z6A9 289 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 TFAP2DQ7Z6R9 452 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 NKAPQ8N5F7 415 aaKnown RBP9.72□□□□□ -0.85
CD44-206ENST00000415148 FUBP3Q96I24 572 aaKnown RBP eCLIP9.72□□□□□ -0.85
CD44-206ENST00000415148 TMEM74Q96NL1 305 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 CSF3RQ99062 836 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 BDH2Q9BUT1 245 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 SEZ6LQ9BYH1 1024 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 NLE1Q9NVX2 485 aaPredicted RBP9.72□□□□□ -0.85
CD44-206ENST00000415148 BTRCQ9Y297 605 aa9.72□□□□□ -0.85
CD44-206ENST00000415148 FAM234BA2RU67 622 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 FUOMA2VDF0 154 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 SUPT3HB4E1H0 165 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 H3BMM5 538 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 INPP4BO15327 924 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 RAMP2O60895 175 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 CNTN5O94779 1100 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 ENO2P09104 434 aaPredicted RBP9.71□□□□□ -0.85
CD44-206ENST00000415148 NR4A1P22736 598 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 MAPKAPK2P49137 400 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 HLCSP50747 726 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 ERVK-8P63133 956 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 SEMA3AQ14563 771 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 PTPRCAPQ14761 206 aa9.71□□□□□ -0.85
CD44-206ENST00000415148 TRIP4Q15650 581 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms