RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 PRAMEP78395 509 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 CRADDP78560 199 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 ILF3Q12906 894 aaKnown RBP eCLIP16.29■□□□□ 0.2
LINC00398-201ENST00000414407 C1orf61Q13536 156 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 DNAJC21Q5F1R6 531 aaKnown RBP16.29■□□□□ 0.2
LINC00398-201ENST00000414407 ZRANB3Q5FWF4 1079 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 DUPD1Q68J44 220 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 AFTPHQ6ULP2 937 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 GLRX5Q86SX6 157 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 CTAGE6Q86UF2 777 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 CTAGE4Q8IX94 777 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 NXPE1Q8N323 547 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 MMGT1Q8N4V1 131 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 EID2Q8N6I1 236 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 CEP112Q8N8E3 955 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 FAM181AQ8N9Y4 354 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 HDAC10Q969S8 669 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 ZNF514Q96K75 400 aaPredicted RBP16.29■□□□□ 0.2
LINC00398-201ENST00000414407 TTC25Q96NG3 672 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 GSDMCQ9BYG8 508 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 RAB17Q9H0T7 212 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 TMEM168Q9H0V1 697 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 SUDS3Q9H7L9 328 aaPredicted RBP16.29■□□□□ 0.2
LINC00398-201ENST00000414407 NCKIPSDQ9NZQ3 722 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 WHRNQ9P202 907 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 SLC2A6Q9UGQ3 507 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 ANAPC5Q9UJX4 755 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 UTP11Q9Y3A2 253 aaKnown RBP16.29■□□□□ 0.2
LINC00398-201ENST00000414407 CEP250Q9BV73 2442 aa16.29■□□□□ 0.2
LINC00398-201ENST00000414407 MYLKQ15746 1914 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 CCDC78A2IDD5 438 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 CCDC162PA2VCL2 907 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 TP73O15350 636 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 GPR39O43194 453 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 ZNF500O60304 480 aaPredicted RBP16.28■□□□□ 0.2
LINC00398-201ENST00000414407 MSH3P20585 1137 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 ACRV1P26436 265 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 FOXN2P32314 431 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 CA5AP35218 305 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 RPL21P46778 160 aaKnown RBP16.28■□□□□ 0.2
LINC00398-201ENST00000414407 ITGA8P53708 1063 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 DRG2P55039 364 aaKnown RBP16.28■□□□□ 0.2
LINC00398-201ENST00000414407 CBLBQ13191 982 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 GTF2H3Q13889 308 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 KHDC1Q4VXA5 237 aaKnown RBP16.28■□□□□ 0.2
LINC00398-201ENST00000414407 LYPLAL1Q5VWZ2 237 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 ZCCHC8Q6NZY4 707 aaKnown RBP16.28■□□□□ 0.2
LINC00398-201ENST00000414407 CERS6Q6ZMG9 384 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 MARK2Q7KZI7 788 aaKnown RBP16.28■□□□□ 0.2
LINC00398-201ENST00000414407 TMEM135Q86UB9 458 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 PDIK1LQ8N165 341 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 OR4L1Q8NH43 312 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC00398-201ENST00000414407 SIGLEC10Q96LC7 697 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 CAMK1GQ96NX5 476 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 COPS8Q99627 209 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 TRIM31Q9BZY9 425 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 CAAP1Q9H8G2 361 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 ARFGAP3Q9NP61 516 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 ZDHHC3Q9NYG2 299 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 ZNHIT2Q9UHR6 403 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 GPR34Q9UPC5 381 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 DOLKQ9UPQ8 538 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 SNX24Q9Y343 169 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 GPSM3Q9Y4H4 160 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 DNMT3AQ9Y6K1 912 aaPredicted RBP16.28■□□□□ 0.2
LINC00398-201ENST00000414407 COL5A1P20908 1838 aaPredicted RBP16.28■□□□□ 0.2
LINC00398-201ENST00000414407 DNAH14Q0VDD8 3507 aa16.28■□□□□ 0.2
LINC00398-201ENST00000414407 IGLV3-16A0A075B6K0 115 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 CFAP99D6REC4 459 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 TRIM38O00635 465 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 KMOO15229 486 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 FFAR2O15552 330 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 TNFSF14O43557 240 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 SIGLEC6O43699 453 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 KCNJ13O60928 360 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 MTX2O75431 263 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 LDOC1O95751 146 aaPredicted RBP16.27■□□□□ 0.2
LINC00398-201ENST00000414407 GOT2P00505 430 aaKnown RBP16.27■□□□□ 0.2
LINC00398-201ENST00000414407 RALBP11234 206 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 PAMP19021 973 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 NMBRP28336 390 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 CLCNKAP51800 687 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 CTBSQ01459 385 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 CALCOCO2Q13137 446 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 ITIH4Q14624 930 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 DEFB133Q30KQ1 61 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 PROX2Q3B8N5 592 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 GLE1Q53GS7 698 aaKnown RBP16.27■□□□□ 0.2
LINC00398-201ENST00000414407 C6orf132Q5T0Z8 1188 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 ZNF648Q5T619 568 aaPredicted RBP16.27■□□□□ 0.2
LINC00398-201ENST00000414407 KIAA0930Q6ICG6 404 aaPredicted RBP16.27■□□□□ 0.2
LINC00398-201ENST00000414407 C8orf74Q6P047 294 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 CASC4Q6P4E1 433 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 TAF8Q7Z7C8 310 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 LRRTM4Q86VH4 590 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 NRROSQ86YC3 692 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 CCNJLQ8IV13 435 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 MPP5Q8N3R9 675 aa16.27■□□□□ 0.2
LINC00398-201ENST00000414407 DEFB124Q8NES8 71 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms