RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 AP3B1O00203 1094 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 GRID2O43424 1007 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 VEGFDO43915 354 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 AVILO75366 819 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 MGAT1P26572 445 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 NPY2RP49146 381 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 SARNPP82979 210 aaKnown RBP23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 LAMB3Q13751 1172 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 LDLRAP1Q5SW96 308 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 TSTD2Q5T7W7 516 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 CRTC3Q6UUV7 619 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 ERMP1Q7Z2K6 904 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 SNX20Q7Z614 316 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 SFTPA2Q8IWL1 248 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 SLC35F3Q8IY50 421 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 PPHLN1Q8NEY8 458 aaKnown RBP23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 OR13J1Q8NGT2 312 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 ZNF592Q92610 1267 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 DPEP2Q9H4A9 486 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 SPATS2LQ9NUQ6 558 aaKnown RBP23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 GULP1Q9UBP9 304 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 CRLS1Q9UJA2 301 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 CHUKO15111 745 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 TTI1O43156 1089 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 PRSS56P0CW18 603 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 CKMT1AP12532 417 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 ACP5P13686 325 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 ITGALP20701 1170 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 PSMA3P25788 255 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 ACADVLP49748 655 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 CDKN1CP49918 316 aaPredicted RBP23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 ZRANB3Q5FWF4 1079 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 PCID2Q5JVF3 399 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 CAND1Q86VP6 1230 aaKnown RBP23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 JAMLQ86YT9 394 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 NAT8LQ8N9F0 302 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 SPATA4Q8NEY3 305 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 TTC25Q96NG3 672 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 IL22Q9GZX6 179 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 SYBUQ9NX95 663 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 TAAR2Q9P1P5 351 aa23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 APOBEC2Q9Y235 224 aaKnown RBP23.56■■□□□ 1.36
UBE2E3-202ENST00000410062 ARHGEF17Q96PE2 2063 aaPredicted RBP23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 OR51F1A6NGY5 319 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 AGAP14A8MT82 685 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 B4DGG1 531 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 GPR89AB7ZAQ6 455 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 GPR89BP0CG08 455 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 AKT1P31749 480 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 ACTR1BP42025 376 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 ACTR1AP61163 376 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 C2orf54Q08AI8 447 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 PLA2G4EQ3MJ16 856 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 PPIL6Q8IXY8 311 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 RASGEF1AQ8N9B8 481 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 KYQ8NBH2 561 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 MCUQ8NE86 351 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 TRIM51Q9BSJ1 452 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 KCNK6Q9Y257 313 aa23.55■■□□□ 1.36
UBE2E3-202ENST00000410062 ZFC3H1O60293 1989 aaKnown RBP23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 MED19A0JLT2 244 aaPredicted RBP23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 CCDC162PA2VCL2 907 aa23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 ACP1P24666 158 aa23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 GTF2H3Q13889 308 aa23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 LRP8Q14114 963 aa23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 NR0B2Q15466 257 aa23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 RNASEH2BQ5TBB1 312 aaKnown RBP23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 SYDE1Q6ZW31 735 aaPredicted RBP23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 NLRP9Q7RTR0 991 aa23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 ZNF547Q8IVP9 402 aa23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 ARL10Q8N8L6 244 aa23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 NAT14Q8WUY8 206 aa23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 GLMNQ92990 594 aa23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 HDAC10Q969S8 669 aa23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 CCDC97Q96F63 343 aaPredicted RBP23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 ZCCHC2Q9C0B9 1178 aaKnown RBP23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 RIMKLBQ9ULI2 386 aa23.54■■□□□ 1.36
UBE2E3-202ENST00000410062 DNALI1O14645 258 aaPredicted RBP23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 URI1O94763 535 aaPredicted RBP23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 MSH3P20585 1137 aa23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 MRPS25P82663 173 aaKnown RBP23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 GUSBP11Q6P575 273 aa23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 DET1Q7L5Y6 550 aa23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 TAS2R42Q7RTR8 314 aa23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 LRRTM4Q86VH4 590 aa23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 TRAPPC5Q8IUR0 188 aa23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 NXPE1Q8N323 547 aa23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 ULK4Q96C45 1275 aa23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 SERPINB12Q96P63 405 aa23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 NCKIPSDQ9NZQ3 722 aa23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 SLC23A2Q9UGH3 650 aa23.53■■□□□ 1.36
UBE2E3-202ENST00000410062 CPED1A4D0V7 1026 aa23.52■■□□□ 1.36
UBE2E3-202ENST00000410062 RFPL3O75679 317 aa23.52■■□□□ 1.36
UBE2E3-202ENST00000410062 DKK1O94907 266 aa23.52■■□□□ 1.36
UBE2E3-202ENST00000410062 ADRB1P08588 477 aa23.52■■□□□ 1.36
UBE2E3-202ENST00000410062 IVDP26440 423 aa23.52■■□□□ 1.36
UBE2E3-202ENST00000410062 DUSP3P51452 185 aaPredicted RBP23.52■■□□□ 1.36
UBE2E3-202ENST00000410062 CTSCP53634 463 aa23.52■■□□□ 1.36
UBE2E3-202ENST00000410062 ACVR1Q04771 509 aa23.52■■□□□ 1.36
UBE2E3-202ENST00000410062 CACNG1Q06432 222 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms