RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 CMC1Q7Z7K0 106 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 C10orf107Q8IVU9 208 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 ULK2Q8IYT8 1036 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 HDDC3Q8N4P3 179 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 TTLQ8NG68 377 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 SIPA1Q96FS4 1042 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 TSGA13Q96PP4 275 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 MECRQ9BV79 373 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 LMAN2LQ9H0V9 348 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 MUC13Q9H3R2 512 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 ZDHHC3Q9NYG2 299 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 TRPS1Q9UHF7 1281 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 UBXN8O00124 270 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 CA9Q16790 459 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 ITPRIPL2Q3MIP1 535 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 ERICH5Q6P6B1 374 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 C15orf39Q6ZRI6 1047 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 TAF8Q7Z7C8 310 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 PEX13Q92968 403 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 MFSD3Q96ES6 412 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 MIPEPQ99797 713 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 PCDHGA11Q9Y5H2 935 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 FOXO6A8MYZ6 492 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 TRIM38O00635 465 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 FFAR3O14843 346 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 NPC1O15118 1278 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 GSC2O15499 205 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 GPR42O15529 346 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 NPHS1O60500 1241 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 OR6A2O95222 327 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 TIMP1P01033 207 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 PRPS2P11908 318 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 WASP42768 502 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 SUOXP51687 545 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 RPS7P62081 194 aaKnown RBP16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 UBAP2LQ14157 1087 aaKnown RBP16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 FASTKD3Q14CZ7 662 aaKnown RBP16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 EIF4HQ15056 248 aaKnown RBP16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 TFB2MQ9H5Q4 396 aaKnown RBP16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 SGK2Q9HBY8 427 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 PTPRHQ9HD43 1115 aa16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 NDRG2Q9UN36 371 aaKnown RBP16.66■□□□□ 0.26
PCDHA13-202ENST00000409494 A8MUI8 341 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 DNAJA2O60884 412 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 SLC22A3O75751 556 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 C16orf62Q7Z3J2 963 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 SNRNP27Q8WVK2 155 aaKnown RBP16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 MPP4Q96JB8 637 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 EPB41L4BQ9H329 900 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 GKN1Q9NS71 199 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 VIPR1P32241 457 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 PSME3P61289 254 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 ESRP1Q6NXG1 681 aaKnown RBP16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 MED27Q6P2C8 311 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 NATD1Q8N6N6 113 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 RNF145Q96MT1 663 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 FKBPLQ9UIM3 349 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 OR10H1Q9Y4A9 318 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 GLI3P10071 1580 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 SOCS5O75159 536 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 MT-CYBP00156 380 aaPredicted RBP16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 CSF2RAP15509 400 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 POU1F1P28069 291 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 NRIP1P48552 1158 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 AP1S2P56377 157 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 CLDN10P78369 228 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 AMZ2Q86W34 360 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 DSELQ8IZU8 1212 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 PHOSPHO2Q8TCD6 241 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 MYRFQ9Y2G1 1151 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 TPRKBQ9Y3C4 175 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 C9IYK1 514 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 UROSP10746 265 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 SLC26A3P40879 764 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 CRATP43155 626 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 TNK2Q07912 1038 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 AAGABQ6PD74 315 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 TMEM220Q6QAJ8 160 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 CYP2R1Q6VVX0 501 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 TPRG1Q6ZUI0 275 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 OR10G6Q8NH81 332 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 DNAJB8Q8NHS0 232 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 MTFMTQ96DP5 389 aaKnown RBP16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 RHBGQ9H310 441 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 ATP6V1HQ9UI12 483 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 CNTN6Q9UQ52 1028 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 COL18A1P39060 1754 aa16.65■□□□□ 0.26
PCDHA13-202ENST00000409494 CLDN4O14493 209 aa16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 PAPSS2O95340 614 aaPredicted RBP16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 CBSLP0DN79 551 aa16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 CBSP35520 551 aa16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 BUD31P41223 144 aaPredicted RBP16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 RAB33AQ14088 237 aa16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 UBXN2BQ14CS0 331 aa16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 MYLK3Q32MK0 819 aa16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 CIR1Q86X95 450 aaPredicted RBP16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 CFAP206Q8IYR0 622 aa16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 BHLHE22Q8NFJ8 381 aaPredicted RBP16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 RAB7BQ96AH8 199 aa16.64■□□□□ 0.26
PCDHA13-202ENST00000409494 NUS1Q96E22 293 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms