RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 MGME1Q9BQP7 344 aa12.66□□□□□ -0.38
CHRNA1-203ENST00000409219 RIOK2Q9BVS4 552 aaKnown RBP12.66□□□□□ -0.38
CHRNA1-203ENST00000409219 NDST4Q9H3R1 872 aa12.66□□□□□ -0.38
CHRNA1-203ENST00000409219 PDE7BQ9NP56 450 aa12.66□□□□□ -0.38
CHRNA1-203ENST00000409219 GPR83Q9NYM4 423 aa12.66□□□□□ -0.38
CHRNA1-203ENST00000409219 AP4E1Q9UPM8 1137 aa12.66□□□□□ -0.38
CHRNA1-203ENST00000409219 CCDC168Q8NDH2 2452 aa12.66□□□□□ -0.38
CHRNA1-203ENST00000409219 TCRBV5S1A1TA0A578 114 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 SIGLEC16A6NMB1 481 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 ZNF185O15231 689 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 TMEM63AO94886 807 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 PEX11BO96011 259 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 AMD1P17707 334 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 ERCC2P18074 760 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 XRCC1P18887 633 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 SLC19A1P41440 591 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 MAXP61244 160 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 RPL7AP62424 266 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 CDK18Q07002 472 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 ELOAQ14241 798 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 KCNAB1Q14722 419 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 PLEKHN1Q494U1 663 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 ARMC12Q5T9G4 340 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 CYB5D1Q6P9G0 228 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 ZNF517Q6ZMY9 492 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 RBM43Q6ZSC3 357 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 FAM92BQ6ZTR7 304 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 RFX8Q6ZV50 586 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 PIH1D2Q8WWB5 315 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 PDLIM2Q96JY6 352 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 ZNF599Q96NL3 588 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 ADAM22Q9P0K1 906 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 ZNF624Q9P2J8 865 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 RARRES3Q9UL19 164 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 CNOT6Q9ULM6 557 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 G3BP2Q9UN86 482 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 FARSAQ9Y285 508 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 MTORP42345 2549 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 A6NL46 340 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 GFPT2O94808 682 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 VIPP01282 170 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 PDHA1P08559 390 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 FOLR1P15328 257 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 ZNF30P17039 623 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 HSPA9P38646 679 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 STC1P52823 247 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 PPP1CAP62136 330 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 RAPSNQ13702 412 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 FAM69BQ5VUD6 431 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 IRGCQ6NXR0 463 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 GLIS1Q8NBF1 620 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 FCRL4Q96PJ5 515 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 WDR24Q96S15 920 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 PCDHB18PQ96TA0 734 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 CNPY3Q9BT09 278 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 STK33Q9BYT3 514 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 VPS16Q9H269 839 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 OSGEPL1Q9H4B0 414 aa12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 DHX35Q9H5Z1 703 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-203ENST00000409219 PIKFYVEQ9Y2I7 2098 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 IGHV5-51A0A0C4DH38 117 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 FADS2P1A8MWK0 482 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 CPNE3O75131 537 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 PRKCSHP14314 528 aaPredicted RBP12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 HNRNPH3P31942 346 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 NSFP46459 744 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 CLCNKAP51800 687 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 OGDHQ02218 1023 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 GPS2Q13227 327 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 ZRSR2Q15696 482 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 VWA3BQ502W6 1294 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 IZUMO3Q5VZ72 239 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 TRIM72Q6ZMU5 477 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 MON1BQ7L1V2 547 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 TRIM48Q8IWZ4 208 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 AOPEPQ8N6M6 819 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 SIDT2Q8NBJ9 832 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 INPP5DQ92835 1189 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 MR1Q95460 341 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 SLC41A2Q96JW4 573 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 KCTD15Q96SI1 283 aaPredicted RBP12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 BARD1Q99728 777 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 SNRNP25Q9BV90 132 aaKnown RBP12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 NUP62CLQ9H1M0 184 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 CARD9Q9H257 536 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 RMI1Q9H9A7 625 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 KLC4Q9NSK0 619 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 SEMA5BQ9P283 1151 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 EPHA6Q9UF33 1036 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 B3GNT3Q9Y2A9 372 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 NTNG1Q9Y2I2 539 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 SIK3Q9Y2K2 1263 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
CHRNA1-203ENST00000409219 MDC1Q14676 2089 aaKnown RBP12.63□□□□□ -0.39
CHRNA1-203ENST00000409219 A0A0J9YYE9 177 aa12.63□□□□□ -0.39
CHRNA1-203ENST00000409219 DAPK3O43293 454 aa12.63□□□□□ -0.39
CHRNA1-203ENST00000409219 GRID2O43424 1007 aa12.63□□□□□ -0.39
CHRNA1-203ENST00000409219 NUAK1O60285 661 aa12.63□□□□□ -0.39
CHRNA1-203ENST00000409219 FZD6O60353 706 aa12.63□□□□□ -0.39
CHRNA1-203ENST00000409219 TRBC1P01850 177 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms