RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 CPNE7Q9UBL6 633 aa12.71□□□□□ -0.37
SNORD88B-201ENST00000408454 PRAMEF33A0A0G2JMD5 474 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 B4GAT1O43505 415 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 SNX2O60749 519 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 PRAMEF10O60809 474 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 DNAJC6O75061 913 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 LCA5LO95447 670 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 SOD1P00441 154 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 ANKRD34CP0C6C1 535 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 XRCC1P18887 633 aaPredicted RBP12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 NDUFS1P28331 727 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 HADHAP40939 763 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 CDKN2BP42772 138 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 POLD2P49005 469 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 ZBTB17Q13105 803 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 LAMB3Q13751 1172 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 AGAP9Q5VTM2 703 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 TRAPPC5Q8IUR0 188 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 CARFQ8N187 725 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 RNF214Q8ND24 703 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 ZFPM2Q8WW38 1151 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 NCSTNQ92542 709 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 ALS2CR12Q96Q35 445 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 CHP1Q99653 195 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 OR2AG1Q9H205 316 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 FBXO8Q9NRD0 319 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 PDP2Q9P2J9 529 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 RSPH14Q9UHP6 348 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 PCDHB3Q9Y5E6 796 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 ALG6Q9Y672 507 aa12.7□□□□□ -0.38
SNORD88B-201ENST00000408454 MACROD2A1Z1Q3 448 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 C5orf60A6NFR6 353 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 ZNF891A8MT65 544 aaPredicted RBP12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 MIF4GDA9UHW6 222 aaKnown RBP12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 H7C0C1 242 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 MATN2O00339 956 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 QSOX1O00391 747 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 CHUKO15111 745 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 POLR1CO15160 346 aaPredicted RBP12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 PPM1DO15297 605 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 STX7O15400 261 aaKnown RBP12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 PSMD3O43242 534 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 KDM1AO60341 852 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 PMPCBO75439 489 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 SLC4A1P02730 911 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 ATP1A1P05023 1023 aaKnown RBP12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 GSTM1P09488 218 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 ZNF7P17097 686 aaPredicted RBP12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 PTPN3P26045 913 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 ATP5OP48047 213 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 RWDD2BP57060 319 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 GSTM4Q03013 218 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 SLC10A2Q12908 348 aaPredicted RBP12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 SEPT6Q14141 434 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 MAP7Q14244 749 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 IL11RAQ14626 422 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 TAZQ16635 292 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 KAZNQ674X7 775 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 BBS12Q6ZW61 710 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 AMZ2Q86W34 360 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 ESX1Q8N693 406 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 CNTD1Q8N815 330 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 ULK4Q96C45 1275 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 DCUN1D1Q96GG9 259 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 MRFAP1L1Q96HT8 127 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 QKIQ96PU8 341 aaKnown RBP eCLIP12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 TRIB3Q96RU7 358 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 CD180Q99467 661 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 TTC1Q99614 292 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 NUDT22Q9BRQ3 303 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 SEMA6CQ9H3T2 930 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 KLC4Q9NSK0 619 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 SHOC2Q9UQ13 582 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 PCDHA13Q9Y5I0 950 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 HEBP2Q9Y5Z4 205 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 LRRK1Q38SD2 2015 aa12.69□□□□□ -0.38
SNORD88B-201ENST00000408454 GLYATL1P3A0A0U1RQE8 302 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 C3orf70A6NLC5 250 aaPredicted RBP12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 BTNL10A8MVZ5 291 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 NRDCO43847 1150 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 UBXN7O94888 489 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 MMP2P08253 660 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 ITIH1P19827 911 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 MSH3P20585 1137 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 AKT1P31749 480 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 PTPN7P35236 360 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 ARL4DP49703 201 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 WNT3AP56704 352 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 MC2RQ01718 297 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 NFATC2Q13469 925 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 C16orf72Q14CZ0 275 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 P3H1Q32P28 736 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 CRTC2Q53ET0 693 aaPredicted RBP12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 ALS2CLQ60I27 953 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 ARMC6Q6NXE6 501 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 ABRAXAS1Q6UWZ7 409 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 MFSD7Q6UXD7 560 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 KDELC2Q7Z4H8 507 aa12.68□□□□□ -0.38
SNORD88B-201ENST00000408454 KIAA1328Q86T90 577 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms