RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 CXorf49A8MYA2 514 aaPredicted RBP32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 VILLO15195 856 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 EPN2O95208 641 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 C1QAP02745 245 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 OGNP20774 298 aaKnown RBP32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 B4GALNT1Q00973 533 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 TMEM115Q12893 351 aaPredicted RBP32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 MAP9Q49MG5 647 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 LYPLAL1Q5VWZ2 237 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 ENPP7Q6UWV6 458 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 CNTN4Q8IWV2 1026 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 SUMF1Q8NBK3 374 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 NAT14Q8WUY8 206 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 UBLCP1Q8WVY7 318 aaPredicted RBP32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 ARRDC1-AS1Q9H2J1 176 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 ATXN10Q9UBB4 475 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 FBXO5Q9UKT4 447 aa32.93■■■□□ 2.86
CSNK1E-204ENST00000403904 OR1I1O60431 355 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 HOXD12P35452 270 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 DPP6P42658 865 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 TEAD4Q15561 434 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 TYSND1Q2T9J0 566 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 KBTBD12Q3ZCT8 623 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 ADGRG6Q86SQ4 1221 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 WDR92Q96MX6 357 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 RABGEF1Q9UJ41 708 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 SPTY2D1-AS1A0A0U1RR47 76 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 A0A1B0GVT2 93 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 FAM159BA6NKW6 160 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 NDUFS3O75489 264 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 MSH3P20585 1137 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 PPARGP37231 505 aaPredicted RBP32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 C21orf59P57076 290 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 MPP1Q00013 466 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 PTK2BQ14289 1009 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 SLC29A2Q14542 456 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 BRD3Q15059 726 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 ZNF789Q5FWF6 425 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 KCTD16Q68DU8 428 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 LAIR1Q6GTX8 287 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 ZNF449Q6P9G9 518 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 MACC1Q6ZN28 852 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 DCP2Q8IU60 420 aaKnown RBP32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 C2CD4AQ8NCU7 369 aaPredicted RBP32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 GABPB2Q8TAK5 448 aaPredicted RBP32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 DCUN1D1Q96GG9 259 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 TCF12Q99081 682 aa32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 FBXO6Q9NRD1 293 aaPredicted RBP32.92■■■□□ 2.86
CSNK1E-204ENST00000403904 TP53BP1Q12888 1972 aaPredicted RBP32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 GPR179Q6PRD1 2367 aa32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 IGLV3-16A0A075B6K0 115 aa32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 S1PR4O95977 384 aa32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 CEACAM5P06731 702 aa32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 KELP23276 732 aa32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 EFTUD2Q15029 972 aaKnown RBP eCLIP32.91■■■□□ 2.861e-7■■■□□ 15.6
CSNK1E-204ENST00000403904 CCDC6Q16204 474 aa32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 UAP1Q16222 522 aaPredicted RBP32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 MARK2Q7KZI7 788 aaKnown RBP32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 SPATS2Q86XZ4 545 aaKnown RBP32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 OR56A4Q8NGH8 313 aa32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 CDKL2Q92772 493 aa32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 SKA1Q96BD8 255 aa32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 FUT8Q9BYC5 575 aa32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 FGF22Q9HCT0 170 aa32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 MRPL40Q9NQ50 206 aaKnown RBP32.91■■■□□ 2.86
CSNK1E-204ENST00000403904 CACNA1EQ15878 2313 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 CCDC151A5D8V7 595 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 PATE3B3GLJ2 98 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 MAGEC1O60732 1142 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 CDK14O94921 469 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 CFIP05156 583 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 MPLP40238 635 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 NBL1P41271 181 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 NXPH1P58417 271 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 FZD2Q14332 565 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 ITIH4Q14624 930 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 DUOXA1Q1HG43 343 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 DET1Q7L5Y6 550 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 CTAGE3PQ8IX95 158 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 ACSS3Q9H6R3 686 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 MOSPD1Q9UJG1 213 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 PNMA8BQ9ULN7 279 aaPredicted RBP32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 SLC17A4Q9Y2C5 497 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 ANKRD6Q9Y2G4 727 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 HCN4Q9Y3Q4 1203 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 PCDHGA5Q9Y5G8 931 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 PSAT1Q9Y617 370 aa32.9■■■□□ 2.86
CSNK1E-204ENST00000403904 A0A087WUV0 522 aaPredicted RBP32.89■■■□□ 2.86
CSNK1E-204ENST00000403904 ERLIN1O75477 346 aa32.89■■■□□ 2.86
CSNK1E-204ENST00000403904 FUCA1P04066 466 aa32.89■■■□□ 2.86
CSNK1E-204ENST00000403904 ZNF8P17098 575 aaPredicted RBP32.89■■■□□ 2.86
CSNK1E-204ENST00000403904 HSD17B3P37058 310 aa32.89■■■□□ 2.86
CSNK1E-204ENST00000403904 RBFAQ8N0V3 343 aa32.89■■■□□ 2.86
CSNK1E-204ENST00000403904 CLDN19Q8N6F1 224 aa32.89■■■□□ 2.86
CSNK1E-204ENST00000403904 RASGEF1AQ8N9B8 481 aa32.89■■■□□ 2.86
CSNK1E-204ENST00000403904 CEP76Q8TAP6 659 aa32.89■■■□□ 2.86
CSNK1E-204ENST00000403904 ZCCHC2Q9C0B9 1178 aaKnown RBP32.89■■■□□ 2.86
CSNK1E-204ENST00000403904 VPS18Q9P253 973 aa32.89■■■□□ 2.86
CSNK1E-204ENST00000403904 CRYL1Q9Y2S2 319 aa32.89■■■□□ 2.86
CSNK1E-204ENST00000403904 PFDN6O15212 129 aa32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms