RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 J3KR12 359 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 GIPC1O14908 333 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 HNRNPCP07910 306 aaKnown RBP eCLIP19.68■□□□□ 0.74
CCDC47-202ENST00000403162 LINC00032P0C843 101 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 PRR35P0CG20 571 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 RPS9P46781 194 aaKnown RBP19.68■□□□□ 0.74
CCDC47-202ENST00000403162 LCP2Q13094 533 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 NFYCQ13952 458 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 LRRTM3Q86VH5 581 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 C7orf61Q8IZ16 206 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 ABI1Q8IZP0 508 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 RYBPQ8N488 228 aaPredicted RBP19.68■□□□□ 0.74
CCDC47-202ENST00000403162 HMCESQ96FZ2 354 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 CNDP2Q96KP4 475 aaKnown RBP19.68■□□□□ 0.74
CCDC47-202ENST00000403162 KCTD14Q9BQ13 255 aaPredicted RBP19.68■□□□□ 0.74
CCDC47-202ENST00000403162 ANAPC2Q9UJX6 822 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 KCTD3Q9Y597 815 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 TNFRSF10BO14763 440 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 CLIC3O95833 236 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 GLP2RO95838 553 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 MTHFD1P11586 935 aaKnown RBP19.68■□□□□ 0.74
CCDC47-202ENST00000403162 EEFSECP57772 596 aaKnown RBP19.68■□□□□ 0.74
CCDC47-202ENST00000403162 RAB15P59190 212 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 MAPRE1Q15691 268 aaKnown RBP19.68■□□□□ 0.74
CCDC47-202ENST00000403162 PIK3R6Q5UE93 754 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.68■□□□□ 0.742e-6■■■■□ 20.1
CCDC47-202ENST00000403162 PNPT1Q8TCS8 783 aaKnown RBP19.68■□□□□ 0.74
CCDC47-202ENST00000403162 TBATAQ96M53 351 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 SERPINB11Q96P15 392 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 KLHL5Q96PQ7 755 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 TUBA1CQ9BQE3 449 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 TMEM9Q9P0T7 183 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 UXTQ9UBK9 157 aaPredicted RBP19.68■□□□□ 0.74
CCDC47-202ENST00000403162 BTRCQ9Y297 605 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 ASPDHA6ND91 283 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 H3BMM5 538 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 INPPL1O15357 1258 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 CD3EAPO15446 510 aaKnown RBP19.67■□□□□ 0.74
CCDC47-202ENST00000403162 EEDO75530 441 aaKnown RBP19.67■□□□□ 0.74
CCDC47-202ENST00000403162 ACRP10323 421 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 CLCQ05315 142 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 LIPEQ05469 1076 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 AASDHQ4L235 1098 aaPredicted RBP19.67■□□□□ 0.74
CCDC47-202ENST00000403162 MRNIPQ6NTE8 343 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 ZNF683Q8IZ20 524 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 KLHL23Q8NBE8 558 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 OR10T2Q8NGX3 314 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 ARRDC2Q8TBH0 407 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 THAP11Q96EK4 314 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 TMEM209Q96SK2 561 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 POLR1BQ9H9Y6 1135 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 AIG1Q9NVV5 245 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 MYO16Q9Y6X6 1858 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 KERAO60938 352 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 GOT2P00505 430 aaKnown RBP19.67■□□□□ 0.74
CCDC47-202ENST00000403162 CYBBP04839 570 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 HAPLN1P10915 354 aaPredicted RBP19.67■□□□□ 0.74
CCDC47-202ENST00000403162 RHOQP17081 205 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 ZFP36L2P47974 494 aaKnown RBP19.67■□□□□ 0.74
CCDC47-202ENST00000403162 DIO3P55073 304 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 KCNK10P57789 538 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 ADARB1P78563 741 aaKnown RBP19.67■□□□□ 0.74
CCDC47-202ENST00000403162 RABL3Q5HYI8 236 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 ACBD5Q5T8D3 534 aaPredicted RBP19.67■□□□□ 0.74
CCDC47-202ENST00000403162 GPR107Q5VW38 600 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 OFCC1Q8IZS5 231 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 LEMD2Q8NC56 503 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 BORCS5Q969J3 196 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 PABPC5Q96DU9 382 aaKnown RBP19.67■□□□□ 0.74
CCDC47-202ENST00000403162 SP110Q9HB58 689 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 PKD2L2Q9NZM6 624 aa19.67■□□□□ 0.74
CCDC47-202ENST00000403162 LDLRP01130 860 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 ETFBP38117 255 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 GATMP50440 423 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 HLCSP50747 726 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 GRSF1Q12849 480 aaKnown RBP eCLIP19.66■□□□□ 0.74
CCDC47-202ENST00000403162 FXNQ16595 210 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 ZNF829Q3KNS6 432 aaPredicted RBP19.66■□□□□ 0.74
CCDC47-202ENST00000403162 KCTD8Q6ZWB6 473 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 NPAS4Q8IUM7 802 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 DNAJB14Q8TBM8 379 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 TBC1D15Q8TC07 691 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 OSCP1Q8WVF1 389 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 KIAA1191Q96A73 305 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 AARSD1Q9BTE6 412 aaKnown RBP19.66■□□□□ 0.74
CCDC47-202ENST00000403162 NUSAP1Q9BXS6 441 aaKnown RBP19.66■□□□□ 0.74
CCDC47-202ENST00000403162 TRIM8Q9BZR9 551 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 TBC1D23Q9NUY8 699 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 TMEM248Q9NWD8 314 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 H0YAE9 185 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 CPNE6O95741 557 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 OGNP20774 298 aaKnown RBP19.66■□□□□ 0.74
CCDC47-202ENST00000403162 EEF1DP29692 281 aaKnown RBP19.66■□□□□ 0.74
CCDC47-202ENST00000403162 BRCC3P46736 316 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 TUSC3Q13454 348 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 AARS2Q5JTZ9 985 aaKnown RBP19.66■□□□□ 0.74
CCDC47-202ENST00000403162 CCNYL2Q5T2Q4 361 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 COL13A1Q5TAT6 717 aaPredicted RBP19.66■□□□□ 0.74
CCDC47-202ENST00000403162 MSANTD2Q6P1R3 559 aa19.66■□□□□ 0.74
CCDC47-202ENST00000403162 TMEM26Q6ZUK4 368 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms