RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 SMIM18P0DKX4 95 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 IMPDH1P20839 514 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CD86P42081 329 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ATP4BP51164 291 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TRAP1Q12931 704 aaKnown RBP15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 HTR4Q13639 388 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 LRP8Q14114 963 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TRIM25Q14258 630 aaKnown RBP15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 REP15Q6BDI9 236 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 LGI2Q8N0V4 545 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 AHI1Q8N157 1196 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 NAT14Q8WUY8 206 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 IGSF8Q969P0 613 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 L3HYPDHQ96EM0 354 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 KLHL32Q96NJ5 620 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SLC25A23Q9BV35 468 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PLA2G2FQ9BZM2 168 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ZYG11BQ9C0D3 744 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CACNA2D2Q9NY47 1150 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 FIS1Q9Y3D6 152 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 H0YJX3 145 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PSMC3P17980 439 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ITKQ08881 620 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 AGKQ53H12 422 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 HACD2Q6Y1H2 254 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TEX26Q8N6G2 289 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TMEM102Q8N9M5 508 aaPredicted RBP15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ST13P5Q8NFI4 369 aaPredicted RBP15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MYEOVQ96EZ4 313 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 HMCESQ96FZ2 354 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RPRD1AQ96P16 312 aaPredicted RBP15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 KXD1Q9BQD3 176 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 FAM83CQ9BQN1 747 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 GSTO2Q9H4Y5 243 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RETREG1Q9H6L5 497 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SP110Q9HB58 689 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TMEM248Q9NWD8 314 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 DUS2Q9NX74 493 aaKnown RBP15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TRAF6Q9Y4K3 522 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 WNT6Q9Y6F9 365 aa15.83■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TRIM24O15164 1050 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TNFAIP8O95379 198 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SNRPB2P08579 225 aaKnown RBP15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RPL5P46777 297 aaKnown RBP15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 NFKB2Q00653 900 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MPP7Q5T2T1 576 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 FAM45BPQ6NSW5 357 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 HMGCLL1Q8TB92 370 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 FAM45AQ8TCE6 357 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 NXPE3Q969Y0 559 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TADA1Q96BN2 335 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PRICKLE1Q96MT3 831 aaPredicted RBP15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RPP25Q9BUL9 199 aaKnown RBP15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MRPS26Q9BYN8 205 aaKnown RBP15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ZNF696Q9H7X3 374 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 UBAP1Q9NZ09 502 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 E7ENX8 843 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 FBP2O00757 339 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 S1PR4O95977 384 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MMP2P08253 660 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ACADVLP49748 655 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 LAMB3Q13751 1172 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 AAK1Q2M2I8 961 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 EML3Q32P44 896 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MPPE1Q53F39 396 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 AP1ARQ63HQ0 302 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PTAR1Q7Z6K3 402 aaPredicted RBP15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PCDH20Q8N6Y1 951 aaKnown RBP15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 OR6P1Q8NGX9 317 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ANKRD49Q8WVL7 239 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 IRF7Q92985 503 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 DUS3LQ96G46 650 aaKnown RBP15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TNFRSF12AQ9NP84 129 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SPAG4Q9NPE6 437 aa15.82■□□□□ 0.12
CHRFAM7A-203ENST00000401522 J3KR12 359 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TSPAN3O60637 253 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RNASEH2AO75792 299 aaKnown RBP15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 IL9P15248 144 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TCN1P20061 433 aaPredicted RBP15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SGSHP51688 502 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PLK1P53350 603 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RPS24P62847 133 aaKnown RBP15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PRAMEP78395 509 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RHDQ02161 417 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 DSC2Q02487 901 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SLC10A7Q0GE19 358 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PDGFRLQ15198 375 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ALFQ53S48 1182 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SIRPB2Q5JXA9 342 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SAMD4BQ5PRF9 694 aaKnown RBP15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ZNF678Q5SXM1 525 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TFAP2DQ7Z6R9 452 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SATL1Q86VE3 508 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CFAP52Q8N1V2 620 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 HJURPQ8NCD3 748 aaPredicted RBP15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PEX13Q92968 403 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 HDAC10Q969S8 669 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PHF21BQ96EK2 531 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ASIC4Q96FT7 647 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ASB2Q96Q27 587 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms