RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 DCBLD1Q8N8Z6 715 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 Q8N9G6 341 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 OR52K1Q8NGK4 314 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 MDM1Q8TC05 714 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ZNF398Q8TD17 642 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 NAT14Q8WUY8 206 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 AP1M1Q9BXS5 423 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 SYNDIG1Q9H7V2 258 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 RMI1Q9H9A7 625 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 LRIT1Q9P2V4 623 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 SLC23A2Q9UGH3 650 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PCDHB1Q9Y5F3 818 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 A0A1W2PQM1 296 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CCDC78A2IDD5 438 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 E7EVH7 732 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PSMD3O43242 534 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 SRP72O76094 671 aaKnown RBP13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PROS1P07225 676 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 FDFT1P37268 417 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CCL7P80098 99 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 SEMA5AQ13591 1074 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PEX6Q13608 980 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ITGA9Q13797 1035 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 SEPT6Q14141 434 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CCDC38Q502W7 563 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 GPRC6AQ5T6X5 926 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 C17orf82Q86X59 251 aaPredicted RBP13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ARL14Q8N4G2 192 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 DNAAF3Q8N9W5 541 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 DTX3LQ8TDB6 740 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PBKQ96KB5 322 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 DNAJC1Q96KC8 554 aaKnown RBP13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 OSBPL9Q96SU4 736 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ASB8Q9H765 288 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 KLC4Q9NSK0 619 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PAK5Q9P286 719 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 TBC1D29Q9UFV1 150 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 FEZ2Q9UHY8 353 aaPredicted RBP13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 MYLKQ15746 1914 aa13.91□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ZNF185O15231 689 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PPM1DO15297 605 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 NUDT21O43809 227 aaKnown RBP13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 VEGFDO43915 354 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 SNX2O60749 519 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CSO75390 466 aaKnown RBP13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CAPNS1P04632 268 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 APRTP07741 180 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 LMAN1P49257 510 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PDE1BQ01064 536 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CDH17Q12864 832 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 TRIP13Q15645 432 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 TTC27Q6P3X3 843 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 LINC00523Q86TU6 105 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 LRRTM4Q86VH4 590 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 RASGEF1AQ8N9B8 481 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 DDHD1Q8NEL9 900 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 OR6C4Q8NGE1 309 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CCDC97Q96F63 343 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 TTC25Q96NG3 672 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 FAM96AQ9H5X1 160 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 APPL1Q9UKG1 709 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 DNAJC16Q9Y2G8 782 aa13.9□□□□□ -0.18
HLA-DQB1-202ENST00000399079 OR2AG2A6NM03 316 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ERI2A8K979 691 aaKnown RBP13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 GPR89AB7ZAQ6 455 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NTN3O00634 580 aaPredicted RBP13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SUN1O94901 812 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 RPLP0P05388 317 aaKnown RBP13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 GPR89BP0CG08 455 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ALDH4A1P30038 563 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CDKN1CP49918 316 aaPredicted RBP13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PDX1P52945 283 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CTSCP53634 463 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 BASP1P80723 227 aaKnown RBP13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CYP4F3Q08477 520 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 NFATC2Q13469 925 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SPIDRQ14159 915 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ST3GAL2Q16842 350 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 INSCQ1MX18 579 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ISXQ2M1V0 245 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 LDLRAP1Q5SW96 308 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PPP1R21Q6ZMI0 780 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SPRED1Q7Z699 444 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 C11orf96Q7Z7L8 435 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TRAPPC5Q8IUR0 188 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CCNJLQ8IV13 435 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 CACTIN-AS1Q8N1I8 211 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SLC37A2Q8TED4 501 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZCCHC14Q8WYQ9 949 aaKnown RBP13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 DEPDC7Q96QD5 511 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 OSGEPL1Q9H4B0 414 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 PRDM8Q9NQV8 689 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 HOMER3Q9NSC5 361 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SMOXQ9NWM0 555 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 TTC7AQ9ULT0 858 aaPredicted RBP13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 SNX12Q9UMY4 172 aa13.9□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZFHX4Q86UP3 3567 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 USP24Q9UPU5 2620 aa13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 ZFC3H1O60293 1989 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-202ENST00000399079 A6NCN8 305 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms