RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 PYDC2Q56P42 97 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 SLC51AQ86UW1 340 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 CENPSQ8N2Z9 138 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 PIK3C3Q8NEB9 887 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 NTAN1Q96AB6 310 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 STRA6Q9BX79 667 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 FTHL17Q9BXU8 183 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 KRCC1Q9NPI7 259 aaPredicted RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 PCDHB7Q9Y5E2 793 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 IRF6O14896 467 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 NOBOXO60393 691 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 NDST3O95803 873 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 CATP04040 527 aaKnown RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 ZNF182P17025 639 aaPredicted RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 SPIBQ01892 262 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 FAM171A1Q5VUB5 890 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 NEK10Q6ZWH5 1172 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 HID1Q8IV36 788 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 REPS1Q96D71 796 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 IPPKQ9H8X2 491 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 PEX16Q9Y5Y5 336 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 PARP4Q9UKK3 1724 aaKnown RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 FAM234BA2RU67 622 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 DARSP14868 501 aaKnown RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 PBLDP30039 288 aaPredicted RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 GRK3P35626 688 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 ATP5C1P36542 298 aaKnown RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 LILRA4P59901 499 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 NIPAL1Q6NVV3 410 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 CDC73Q6P1J9 531 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 CAMKK1Q8N5S9 505 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 PPP1R13LQ8WUF5 828 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 EMID1Q96A84 441 aaPredicted RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 FEM1CQ96JP0 617 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 CHCHD6Q9BRQ6 235 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 CRISPLD1Q9H336 500 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 KANSL3Q9P2N6 904 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 ZNF214Q9UL59 606 aaPredicted RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 ZNF490Q9ULM2 529 aaPredicted RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 TRPV2Q9Y5S1 764 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 SNX10Q9Y5X0 201 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 A8MX80 341 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 H3BNH8 94 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 CLIC3O95833 236 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 ALDH2P05091 517 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 UGT2B4P06133 528 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 SMIM10L2AP0DMW4 78 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 SMIM10L2BP0DMW5 78 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 CDH1P12830 882 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 ERVK-8P63133 956 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 ATAD3BQ5T9A4 648 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 ERICH5Q6P6B1 374 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 SLC35F5Q8WV83 523 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 NACC2Q96BF6 587 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 NSMCE3Q96MG7 304 aa10.98□□□□□ -0.65
HPS4-202ENST00000398145 ADARB2Q9NS39 739 aaKnown RBP10.98□□□□□ -0.65
HPS4-202ENST00000398145 CXCR6O00574 342 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 KPNA6O60684 536 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 SIX3O95343 332 aaPredicted RBP10.97□□□□□ -0.65
HPS4-202ENST00000398145 C8BP07358 591 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 NR2F6P10588 404 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 COPZ1P61923 177 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 JAG1P78504 1218 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 TAC4Q86UU9 113 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 GATAD2AQ86YP4 633 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 ZC3H7AQ8IWR0 971 aaKnown RBP10.97□□□□□ -0.65
HPS4-202ENST00000398145 WDTC1Q8N5D0 677 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 SLC13A3Q8WWT9 602 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 AP3S1Q92572 193 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 MRPS31Q92665 395 aaKnown RBP10.97□□□□□ -0.65
HPS4-202ENST00000398145 FBXL20Q96IG2 436 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 ABCG8Q9H221 673 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 TMPRSS4Q9NRS4 437 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 ING3Q9NXR8 418 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 MTRRQ9UBK8 725 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 COL1A2P08123 1366 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 CNTNAP1P78357 1384 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 KRT87PA6NCN2 255 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 ZNF487B1APH4 448 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 H0YJX3 145 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 PGLSO95336 258 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 FOXM1Q08050 763 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 TUBA3CQ13748 450 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 SKIV2LQ15477 1246 aaKnown RBP10.97□□□□□ -0.65
HPS4-202ENST00000398145 SYPL2Q5VXT5 272 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 MZT2AQ6P582 158 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 KLHL35Q6PF15 583 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 ZNF773Q6PK81 442 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 PTCHD4Q6ZW05 846 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 ZDHHC21Q8IVQ6 265 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 RBFAQ8N0V3 343 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 SIX5Q8N196 739 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 TTC29Q8NA56 475 aaPredicted RBP10.97□□□□□ -0.65
HPS4-202ENST00000398145 IRGQQ8WZA9 623 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 BIRC8Q96P09 236 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 KCNK13Q9HB14 408 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 ZDHHC7Q9NXF8 308 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 ATP6V1HQ9UI12 483 aa10.97□□□□□ -0.65
HPS4-202ENST00000398145 AGO1Q9UL18 857 aaKnown RBP10.97□□□□□ -0.65
HPS4-202ENST00000398145 PCDHB9Q9Y5E1 797 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms