RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 ANKRD49Q8WVL7 239 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 COG8Q96MW5 612 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 OR52E6Q96RD3 313 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 LRRC3Q9BY71 257 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ZNF556Q9HAH1 456 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 GNPTGQ9UJJ9 305 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ITGB1BP2Q9UKP3 347 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 GPC6Q9Y625 555 aaPredicted RBP11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 A0A1W2PP18 115 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CCDC162PA2VCL2 907 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MED26O95402 600 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CAPN1P07384 714 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CAPN3P20807 821 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SOX4Q06945 474 aaPredicted RBP11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 DNASE1L3Q13609 305 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SPOUT1Q5T280 376 aaKnown RBP11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ZNF621Q6ZSS3 439 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SZRD1Q7Z422 152 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CLEC14AQ86T13 490 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PDPRQ8NCN5 879 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 OR10Q1Q8NGQ4 319 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SPPL2AQ8TCT8 520 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 B3GALT6Q96L58 329 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MUC13Q9H3R2 512 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MARCH2Q9P0N8 246 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 DNAJC15Q9Y5T4 150 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CROCCQ5TZA2 2017 aa11.04□□□□□ -0.64
CSGALNACT1-202ENST00000397998 A0A1W2PQH9 124 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 J3KR12 359 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 BCKDKO14874 412 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RGS14O43566 566 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RPP40O75818 363 aaKnown RBP11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MYO1DO94832 1006 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 WDR47O94967 919 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MMP3P08254 477 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 EDNRBP24530 442 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 GABRB3P28472 473 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 BMXP51813 675 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RAB15P59190 212 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CYP4F2P78329 520 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CYP4F3Q08477 520 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 IQSEC1Q6DN90 963 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 GLB1LQ6UWU2 654 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ATG14Q6ZNE5 492 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 GPRIN1Q7Z2K8 1008 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 LRRC49Q8IUZ0 686 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CFAP52Q8N1V2 620 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SLC15A4Q8N697 577 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 OPTCQ9UBM4 332 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 FAM32AQ9Y421 112 aaKnown RBP11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 FUOMA2VDF0 154 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 A8MX80 341 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ZBTB42B2RXF5 422 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PPP6CO00743 305 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ULK1O75385 1050 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 LRATO95237 230 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RAP2AP10114 183 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PORP16435 677 aaPredicted RBP11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MYF6P23409 242 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CPT1AP50416 773 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ARSFP54793 590 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RELAQ04206 551 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 NFATC3Q12968 1075 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CSTF3Q12996 717 aaKnown RBP11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ZNF177Q13360 481 aaPredicted RBP11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CPSF6Q16630 551 aaKnown RBP eCLIP11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 UNC50Q53HI1 259 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ZNF549Q6P9A3 640 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ZNF773Q6PK81 442 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RNF19BQ6ZMZ0 732 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CARM1Q86X55 608 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ARL10Q8N8L6 244 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RTL3Q8N8U3 475 aaKnown RBP11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 KCTD13Q8WZ19 329 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 LRCH3Q96II8 777 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 TINF2Q9BSI4 451 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ATP13A1Q9HD20 1204 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CRTAC1Q9NQ79 661 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SNX8Q9Y5X2 465 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 COL1A2P08123 1366 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PDHXO00330 501 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SCAMP3O14828 347 aaKnown RBP11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SNPHO15079 494 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 FGF1P05230 155 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 UROSP10746 265 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SH3BP2P78314 561 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 UBE3AQ05086 875 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RUNX1T1Q06455 604 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CYP2A13Q16696 494 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PKDCCQ504Y2 493 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 P2RY8Q86VZ1 359 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CILP2Q8IUL8 1156 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 OR9Q1Q8NGQ5 310 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RANBP9Q96S59 729 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RBM4BQ9BQ04 359 aaKnown RBP11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RBM4Q9BWF3 364 aaKnown RBP11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RPF2Q9H7B2 306 aaKnown RBP11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 NMRK2Q9NPI5 230 aa11.03□□□□□ -0.64
CSGALNACT1-202ENST00000397998 TMEM9Q9P0T7 183 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms