RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 IL12RB1P42701 662 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 NOP2P46087 812 aaKnown RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 HK3P52790 923 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 PNLIPRP1P54315 467 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 TPI1P60174 286 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 GFPT1Q06210 699 aaPredicted RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 DPTQ07507 201 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 EIF3IQ13347 325 aaKnown RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 MTM1Q13496 603 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 DPYSQ14117 519 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 ERV3-1Q14264 604 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 FGL2Q14314 439 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 CST6Q15828 149 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 FUT11Q495W5 492 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 CCDC14Q49A88 953 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 ZNF805Q5CZA5 627 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 OTUD1Q5VV17 481 aaPredicted RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 PRAMEF9Q5VWM5 478 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 CAVIN1Q6NZI2 390 aaKnown RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 TMEM25Q86YD3 366 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 PHYKPLQ8IUZ5 450 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 KATNAL2Q8IYT4 538 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 HDDC3Q8N4P3 179 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 OR2AP1Q8NGE2 309 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 RXFP2Q8WXD0 754 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 KRT35Q92764 455 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 ECHDC3Q96DC8 303 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 RAX2Q96IS3 184 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 MRGPRX1Q96LB2 322 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 RPRD1AQ96P16 312 aaPredicted RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 NUDCD1Q96RS6 583 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 SLC22A12Q96S37 553 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 MGME1Q9BQP7 344 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 GHITMQ9H3K2 345 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 ATP13A3Q9H7F0 1226 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 PDFQ9HBH1 243 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 PRSS16Q9NQE7 514 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 RIC8BQ9NVN3 520 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 GTSE1Q9NYZ3 720 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 CYTH4Q9UIA0 394 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 SLC13A4Q9UKG4 626 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 USP18Q9UMW8 372 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 NDRG2Q9UN36 371 aaKnown RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 NEU3Q9UQ49 428 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 ATP23Q9Y6H3 246 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 ST8SIA5O15466 376 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 BUB1BO60566 1050 aaPredicted RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 SEMA4FO95754 770 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 AVPP01185 164 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 PTMAP06454 111 aaKnown RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 ALPIP09923 528 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 ALAS2P22557 587 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 IGFBP6P24592 240 aaPredicted RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 SERPINA4P29622 427 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 HLA-FP30511 346 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 ARSEP51690 589 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 GALNT2Q10471 571 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 SPIDRQ14159 915 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 NR1D2Q14995 579 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 NAA25Q14CX7 972 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 PDK1Q15118 436 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 SPA17Q15506 151 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 C9orf64Q5T6V5 341 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 NAA35Q5VZE5 725 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 CDPF1Q6NVV7 123 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 FBXL22Q6P050 247 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 SLC22A25Q6T423 547 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 DPPA4Q7L190 304 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 PPP1R3BQ86XI6 285 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 GALNT13Q8IUC8 556 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 CILP2Q8IUL8 1156 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 RCOR2Q8IZ40 523 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 ZNF655Q8N720 491 aaPredicted RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 GLIS1Q8NBF1 620 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 TXNDC5Q8NBS9 432 aaKnown RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 EXD1Q8NHP7 514 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 UBA3Q8TBC4 463 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 FAM172AQ8WUF8 416 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 PSKH2Q96QS6 385 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 PSMB7Q99436 277 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 RPP25Q9BUL9 199 aaKnown RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 FRMD8Q9BZ67 464 aaPredicted RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 FAM129AQ9BZQ8 928 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 VPS16Q9H269 839 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 ACSS3Q9H6R3 686 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 KRT84Q9NSB2 600 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 SEMA4GQ9NTN9 838 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 UBA2Q9UBT2 640 aaPredicted RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 CNOT8Q9UFF9 292 aaKnown RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 CHORDC1Q9UHD1 332 aaPredicted RBP3.78□□□□□ -1.8
UBE3A-202ENST00000397954 TCFL5Q9UL49 500 aa3.78□□□□□ -1.8
UBE3A-202ENST00000397954 MEI4A8MW99 385 aa3.77□□□□□ -1.81
UBE3A-202ENST00000397954 C22orf46C9J442 243 aa3.77□□□□□ -1.81
UBE3A-202ENST00000397954 EEF2KO00418 725 aaKnown RBP3.77□□□□□ -1.81
UBE3A-202ENST00000397954 DCLK1O15075 740 aa3.77□□□□□ -1.81
UBE3A-202ENST00000397954 ZNF205O95201 554 aa3.77□□□□□ -1.81
UBE3A-202ENST00000397954 HNRNPA2B1P22626 353 aaKnown RBP3.77□□□□□ -1.81
UBE3A-202ENST00000397954 PSMA2P25787 234 aa3.77□□□□□ -1.81
UBE3A-202ENST00000397954 SLC6A4P31645 630 aa3.77□□□□□ -1.81
UBE3A-202ENST00000397954 HDAC4P56524 1084 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms