RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 HMGB1P1B2RPK0 211 aaPredicted RBP13.17□□□□□ -0.3
SEC13-209ENST00000397117 ADH1BP00325 375 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 ACADMP11310 421 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 KRT15P19012 456 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 ARNTP27540 789 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 VIPR1P32241 457 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 SERPINB9P50453 376 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 SUOXP51687 545 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 ARSDP51689 593 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 AFF3P51826 1226 aaKnown RBP13.17□□□□□ -0.3
SEC13-209ENST00000397117 SEMG2Q02383 582 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 SUZ12Q15022 739 aaKnown RBP13.17□□□□□ -0.3
SEC13-209ENST00000397117 AGBL2Q5U5Z8 902 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 LRRC66Q68CR7 880 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 ZNF776Q68DI1 518 aaPredicted RBP13.17□□□□□ -0.3
SEC13-209ENST00000397117 KCTD16Q68DU8 428 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 ZNF470Q6ECI4 717 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 AFTPHQ6ULP2 937 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 PTAR1Q7Z6K3 402 aaPredicted RBP13.17□□□□□ -0.3
SEC13-209ENST00000397117 STRA8Q7Z7C7 330 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 TSPAN33Q86UF1 283 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 FAM124AQ86V42 546 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 CNPY4Q8N129 248 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 GALNT15Q8N3T1 639 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 OR2T3Q8NH03 318 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 DCAKDQ8WVC6 231 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 CDKN2AIPNLQ96HQ2 116 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 RSPH9Q9H1X1 276 aaPredicted RBP13.17□□□□□ -0.3
SEC13-209ENST00000397117 C6orf106Q9H6K1 298 aaPredicted RBP13.17□□□□□ -0.3
SEC13-209ENST00000397117 SUDS3Q9H7L9 328 aaPredicted RBP13.17□□□□□ -0.3
SEC13-209ENST00000397117 IL17CQ9P0M4 197 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 SLC17A6Q9P2U8 582 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 ZNF180Q9UJW8 692 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 SNX11Q9Y5W9 270 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 FLNBO75369 2602 aaKnown RBP13.16□□□□□ -0.3
SEC13-209ENST00000397117 A0A087WV48 116 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 CCDC162PA2VCL2 907 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 NEMP1O14524 444 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 TNFSF14O43557 240 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 UGT1A9O60656 530 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 FAM155BO75949 473 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 KRT38O76015 456 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 GOT2P00505 430 aaKnown RBP13.16□□□□□ -0.3
SEC13-209ENST00000397117 ZNF30P17039 623 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 OAS2P29728 719 aaKnown RBP13.16□□□□□ -0.3
SEC13-209ENST00000397117 ACSL1P33121 698 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 GP5P40197 560 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 NEK3P51956 506 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 CCDC15Q0P6D6 951 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 ELP6Q0PNE2 266 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 CST6Q15828 149 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 CDKN3Q16667 212 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 TTMPQ5BVD1 217 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 GRTP1Q5TC63 336 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 MRNIPQ6NTE8 343 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 ERN2Q76MJ5 926 aaKnown RBP13.16□□□□□ -0.3
SEC13-209ENST00000397117 SDCCAG8Q86SQ7 713 aaPredicted RBP13.16□□□□□ -0.3
SEC13-209ENST00000397117 CNTN4Q8IWV2 1026 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 LMNTD2Q8IXW0 634 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 OR4L1Q8NH43 312 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 ARRDC3Q96B67 414 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 C19orf43Q9BQ61 176 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 HDAC8Q9BY41 377 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 UGT1A7Q9HAW7 530 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 UGT1A10Q9HAW8 530 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 UGT1A8Q9HAW9 530 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 CATSPERZQ9NTU4 200 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 GGT7Q9UJ14 662 aa13.16□□□□□ -0.3
SEC13-209ENST00000397117 NOVA2Q9UNW9 492 aaKnown RBP13.16□□□□□ -0.3
SEC13-209ENST00000397117 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.16□□□□□ -0.3
SEC13-209ENST00000397117 MYLKQ15746 1914 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 OR51F1A6NGY5 319 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 GOLGA8CPA6NN73 597 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 MID1O15344 667 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 CD3EAPO15446 510 aaKnown RBP13.15□□□□□ -0.3
SEC13-209ENST00000397117 ADRB3P13945 408 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 C5AR1P21730 350 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 LHCGRP22888 699 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 PSMA3P25788 255 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 CNTFP26441 200 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 METAP1P53582 386 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 PTSQ03393 145 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 FASTKD1Q53R41 847 aaKnown RBP13.15□□□□□ -0.3
SEC13-209ENST00000397117 ZDHHC20Q5W0Z9 365 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 PACS1Q6VY07 963 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 KIAA0408Q6ZU52 694 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 DPPA4Q7L190 304 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 CACUL1Q86Y37 369 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 RAB7BQ96AH8 199 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 EID2BQ96D98 161 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 TM9SF3Q9HD45 589 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 PKD2L2Q9NZM6 624 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 FKBPLQ9UIM3 349 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 ANKRD6Q9Y2G4 727 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 PSAT1Q9Y617 370 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 BPTFQ12830 3046 aa13.15□□□□□ -0.3
SEC13-209ENST00000397117 H7C0S8 307 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 PCDHGA12O60330 932 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 DNTTP04053 509 aa13.14□□□□□ -0.31
SEC13-209ENST00000397117 SNRPAP09012 282 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms