RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 OTUB2Q96DC9 234 aa16■□□□□ 0.15
SNX6-202ENST00000396526 ZNF641Q96N77 438 aaPredicted RBP16■□□□□ 0.15
SNX6-202ENST00000396526 CDRT15Q96T59 188 aa16■□□□□ 0.15
SNX6-202ENST00000396526 HGH1Q9BTY7 390 aa16■□□□□ 0.15
SNX6-202ENST00000396526 WDR41Q9HAD4 459 aa16■□□□□ 0.15
SNX6-202ENST00000396526 POMPQ9Y244 141 aa16■□□□□ 0.15
SNX6-202ENST00000396526 NEDD8-MDP1E9PL57 170 aa16■□□□□ 0.15
SNX6-202ENST00000396526 RAD51BO15315 384 aa16■□□□□ 0.15
SNX6-202ENST00000396526 CLDN7O95471 211 aa16■□□□□ 0.15
SNX6-202ENST00000396526 SNRPB2P08579 225 aaKnown RBP16■□□□□ 0.15
SNX6-202ENST00000396526 HNRNPA1P09651 372 aaKnown RBP eCLIP16■□□□□ 0.15
SNX6-202ENST00000396526 PABPC1P11940 636 aaKnown RBP16■□□□□ 0.15
SNX6-202ENST00000396526 C1QTNF8P60827 252 aa16■□□□□ 0.15
SNX6-202ENST00000396526 SH3BP2P78314 561 aa16■□□□□ 0.15
SNX6-202ENST00000396526 NFATC2Q13469 925 aa16■□□□□ 0.15
SNX6-202ENST00000396526 TEAD2Q15562 447 aa16■□□□□ 0.15
SNX6-202ENST00000396526 RBBP7Q16576 425 aa16■□□□□ 0.15
SNX6-202ENST00000396526 CARD16Q5EG05 197 aa16■□□□□ 0.15
SNX6-202ENST00000396526 CTSL3PQ5NE16 218 aa16■□□□□ 0.15
SNX6-202ENST00000396526 PCYOX1LQ8NBM8 494 aa16■□□□□ 0.15
SNX6-202ENST00000396526 TWIST2Q8WVJ9 160 aa16■□□□□ 0.15
SNX6-202ENST00000396526 IRF7Q92985 503 aa16■□□□□ 0.15
SNX6-202ENST00000396526 TUBGCP3Q96CW5 907 aa16■□□□□ 0.15
SNX6-202ENST00000396526 NAF1Q96HR8 494 aaKnown RBP16■□□□□ 0.15
SNX6-202ENST00000396526 CCT7Q99832 543 aa16■□□□□ 0.15
SNX6-202ENST00000396526 CIPCQ9C0C6 399 aa16■□□□□ 0.15
SNX6-202ENST00000396526 SMG9Q9H0W8 520 aaKnown RBP16■□□□□ 0.15
SNX6-202ENST00000396526 SEMA4BQ9NPR2 832 aaPredicted RBP16■□□□□ 0.15
SNX6-202ENST00000396526 NCF1BA6NI72 391 aaPredicted RBP16■□□□□ 0.15
SNX6-202ENST00000396526 NCF1CA8MVU1 366 aaPredicted RBP16■□□□□ 0.15
SNX6-202ENST00000396526 NCF1P14598 390 aaPredicted RBP16■□□□□ 0.15
SNX6-202ENST00000396526 ANPEPP15144 967 aa16■□□□□ 0.15
SNX6-202ENST00000396526 LBPP18428 481 aa16■□□□□ 0.15
SNX6-202ENST00000396526 ECT2LQ008S8 904 aa16■□□□□ 0.15
SNX6-202ENST00000396526 DGKKQ5KSL6 1271 aa16■□□□□ 0.15
SNX6-202ENST00000396526 NUSAP1Q9BXS6 441 aaKnown RBP16■□□□□ 0.15
SNX6-202ENST00000396526 CPEB1Q9BZB8 566 aaKnown RBP16■□□□□ 0.15
SNX6-202ENST00000396526 EPS15L1Q9UBC2 864 aa16■□□□□ 0.15
SNX6-202ENST00000396526 MED16Q9Y2X0 877 aa16■□□□□ 0.15
SNX6-202ENST00000396526 PABPN1LA6NDY0 278 aaKnown RBP15.99■□□□□ 0.15
SNX6-202ENST00000396526 RHOP08100 348 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 HOXA9P31269 272 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 EPHA5P54756 1037 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 MAP7D1Q3KQU3 841 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 PELI3Q8N2H9 469 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 BADQ92934 168 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 ATP6V1E2Q96A05 226 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 SCRN2Q96FV2 425 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 P2RY12Q9H244 342 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 CCDC167Q9P0B6 97 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 INTS6Q9UL03 887 aaKnown RBP15.99■□□□□ 0.15
SNX6-202ENST00000396526 CLEC4EQ9ULY5 219 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 HIDE1A8MVS5 230 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 TRIM16O95361 564 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 HLA-FP30511 346 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 ACADVLP49748 655 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 ARHGEF7Q14155 803 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 CRY1Q16526 586 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 TMEM25Q86YD3 366 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 HPS6Q86YV9 775 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 PBXIP1Q96AQ6 731 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 LYSMD1Q96S90 227 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 HTATIP2Q9BUP3 242 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 FAM126AQ9BYI3 521 aaPredicted RBP15.99■□□□□ 0.15
SNX6-202ENST00000396526 ZDHHC6Q9H6R6 413 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 RIC8BQ9NVN3 520 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 HCFC1R1Q9NWW0 138 aa15.99■□□□□ 0.15
SNX6-202ENST00000396526 UBFD1O14562 309 aaKnown RBP15.98■□□□□ 0.15
SNX6-202ENST00000396526 POLR2EP19388 210 aaKnown RBP15.98■□□□□ 0.15
SNX6-202ENST00000396526 ME2P23368 584 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 GKP32189 559 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 S100A14Q9HCY8 104 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 IL26Q9NPH9 171 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 SPHK2Q9NRA0 654 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 MCM8Q9UJA3 840 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 ATP6AP2A0A1C7CYW4 349 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 ATP6AP2O75787 350 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 PRAMEF12O95522 483 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 RPS17P08708 135 aaKnown RBP15.98■□□□□ 0.15
SNX6-202ENST00000396526 CCNHP51946 323 aaPredicted RBP15.98■□□□□ 0.15
SNX6-202ENST00000396526 PKNOX1P55347 436 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 PTPRRQ15256 657 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 SETMARQ53H47 684 aaPredicted RBP15.98■□□□□ 0.15
SNX6-202ENST00000396526 TCHHL1Q5QJ38 904 aaPredicted RBP15.98■□□□□ 0.15
SNX6-202ENST00000396526 LARP4Q71RC2 724 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNX6-202ENST00000396526 LBHD1Q9BQE6 289 aaPredicted RBP15.98■□□□□ 0.15
SNX6-202ENST00000396526 C1QTNF3Q9BXJ4 246 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 MTF2Q9Y483 593 aaPredicted RBP15.98■□□□□ 0.15
SNX6-202ENST00000396526 DNAJC15Q9Y5T4 150 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 ESRRBO95718 433 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 UROSP10746 265 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 SPPL3Q8TCT6 385 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 ULK4Q96C45 1275 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 SLC2A11Q9BYW1 496 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 ADA2Q9NZK5 511 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 ANGPTL3Q9Y5C1 460 aa15.98■□□□□ 0.15
SNX6-202ENST00000396526 KLK8O60259 260 aa15.97■□□□□ 0.15
SNX6-202ENST00000396526 RFPL2O75678 378 aa15.97■□□□□ 0.15
SNX6-202ENST00000396526 SLC25A14O95258 325 aaPredicted RBP15.97■□□□□ 0.15
SNX6-202ENST00000396526 BPIP17213 487 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms