RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 WDR24Q96S15 920 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 XPO4Q9C0E2 1151 aaKnown RBP17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 RTN4Q9NQC3 1192 aaKnown RBP17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 POT1Q9NUX5 634 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 EPHA6Q9UF33 1036 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 CROTQ9UKG9 612 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 VPS4AQ9UN37 437 aa17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 ZFC3H1O60293 1989 aaKnown RBP17.27■□□□□ 0.36
EXOSC3-202ENST00000396521 FADS2P1A8MWK0 482 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 CREG1O75629 220 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 SLC25A14O95258 325 aaPredicted RBP17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 NDUFA10O95299 355 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 DCDC1P59894 354 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 DSC2Q02487 901 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 SLC25A11Q02978 314 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 ERV3-1Q14264 604 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 ZNF569Q5MCW4 686 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 CCDC183Q5T5S1 534 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 WASH2PQ6VEQ5 465 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 EFCAB3Q8N7B9 438 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 GALNT11Q8NCW6 608 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 LPCAT1Q8NF37 534 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 THAP4Q8WY91 577 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 OR6C1Q96RD1 312 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 SRPK1Q96SB4 655 aaKnown RBP17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 GPR87Q9BY21 358 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 RAB33BQ9H082 229 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 WASH6PQ9NQA3 447 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 KLC4Q9NSK0 619 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 LMBRD1Q9NUN5 540 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 ATXN10Q9UBB4 475 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 NFKBIL1Q9UBC1 381 aaPredicted RBP17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 TTLL3Q9Y4R7 772 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 PCYT1BQ9Y5K3 369 aaPredicted RBP17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 ADGRG1Q9Y653 693 aa17.26■□□□□ 0.35
EXOSC3-202ENST00000396521 PIPSLA2A3N6 862 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 BLACEA4D250 179 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 MYO1FO00160 1098 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 CHUKO15111 745 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 KMOO15229 486 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 MTSS1O43312 755 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 VEGFDO43915 354 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 KCNJ13O60928 360 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 KATNA1O75449 491 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 RASSF9O75901 435 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 TCF4P15884 667 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 VCLP18206 1134 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 F8A1P23610 371 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 PDK2Q15119 407 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 AGAP9Q5VTM2 703 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 KLHL35Q6PF15 583 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 ABRAXAS1Q6UWZ7 409 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 PPP1R3BQ86XI6 285 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 GALNT6Q8NCL4 622 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 KLHL6Q8WZ60 621 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 TGM7Q96PF1 710 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 ZNF670Q9BS34 389 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 TIMM29Q9BSF4 260 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 HSD3B7Q9H2F3 369 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 OSGEPL1Q9H4B0 414 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 ZFYVE1Q9HBF4 777 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 PDE7BQ9NP56 450 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 OGFRQ9NZT2 677 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 LNPEPQ9UIQ6 1025 aa17.25■□□□□ 0.35
EXOSC3-202ENST00000396521 UNC79Q9P2D8 2635 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 KIAA0754O94854 1291 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 ZNF8P17098 575 aaPredicted RBP17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 CASP14P31944 242 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 SLC19A1P41440 591 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 CAPZBP47756 277 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 GFERP55789 205 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 QPCTQ16769 361 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 INSCQ1MX18 579 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 ATP1A1-AS1Q5TC04 95 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 TRAM1L1Q8N609 369 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 UBXN4Q92575 508 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 SMIM14Q96QK8 99 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 SPATA16Q9BXB7 569 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 TWSG1Q9GZX9 223 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 OR2AG1Q9H205 316 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 MAGEE1Q9HCI5 957 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 LCMT1Q9UIC8 334 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 TLK1Q9UKI8 766 aa17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 MRPS18BQ9Y676 258 aaKnown RBP17.24■□□□□ 0.35
EXOSC3-202ENST00000396521 PDZK1P1A8MUH7 402 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 MFSD11O43934 449 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 SPAG6O75602 509 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 KRT7P08729 469 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 ZNF28P17035 718 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 ZNF7P17097 686 aaPredicted RBP17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 TYRP1P17643 537 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 NELFEP18615 380 aaKnown RBP17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 IDSP22304 550 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 VARSP26640 1264 aaKnown RBP17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 SEPHS1P49903 392 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 MLLT10P55197 1068 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 SEMA5AQ13591 1074 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 DNASE1L3Q13609 305 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 IHHQ14623 411 aa17.23■□□□□ 0.35
EXOSC3-202ENST00000396521 FHL5Q5TD97 284 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms