RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 EME2A4GXA9 379 aaPredicted RBP11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 SAC3D1A6NKF1 404 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 FAM58BPP0C7Q3 252 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 INHBCP55103 352 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 IHHQ14623 411 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 KLHDC10Q6PID8 442 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 SPATA19Q7Z5L4 167 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 SERPINA9Q86WD7 417 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 LRTOMTQ8WZ04 291 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 C3orf30Q96M34 536 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 TRAPPC9Q96Q05 1148 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 CLSTN3Q9BQT9 956 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 NOL11Q9H8H0 719 aaKnown RBP11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 VCX3AQ9NNX9 186 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 SPG21Q9NZD8 308 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 FAM8A1Q9UBU6 413 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 POLG2Q9UHN1 485 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 PCDHB1Q9Y5F3 818 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 PEX1O43933 1283 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 RNASEH1O60930 286 aaKnown RBP11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 SLC22A3O75751 556 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 PARNO95453 639 aaKnown RBP11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 CLPTM1O96005 669 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 DGKAP23743 735 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 AKT1P31749 480 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 AP1S1P61966 158 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 CYP4F8P98187 520 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 ACVR1Q04771 509 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 TYSND1Q2T9J0 566 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 RBFAQ8N0V3 343 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 CDK15Q96Q40 435 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 FEM1AQ9BSK4 669 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 TRIM54Q9BYV2 358 aa11.46□□□□□ -0.57
PDXDC1-202ENST00000396410 INPP4BO15327 924 aa11.46□□□□□ -0.58
PDXDC1-202ENST00000396410 ARHGEF7Q14155 803 aa11.46□□□□□ -0.58
PDXDC1-202ENST00000396410 AASDHQ4L235 1098 aaPredicted RBP11.46□□□□□ -0.58
PDXDC1-202ENST00000396410 C6orf52Q5T4I8 152 aa11.46□□□□□ -0.58
PDXDC1-202ENST00000396410 CERS6Q6ZMG9 384 aa11.46□□□□□ -0.58
PDXDC1-202ENST00000396410 PIANPQ8IYJ0 282 aa11.46□□□□□ -0.58
PDXDC1-202ENST00000396410 PELI3Q8N2H9 469 aa11.46□□□□□ -0.58
PDXDC1-202ENST00000396410 GATA6Q92908 595 aa11.46□□□□□ -0.58
PDXDC1-202ENST00000396410 CEP295NLQ96MC4 621 aa11.46□□□□□ -0.58
PDXDC1-202ENST00000396410 VPS51Q9UID3 782 aa11.46□□□□□ -0.58
PDXDC1-202ENST00000396410 TIPRLO75663 272 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 SLC25A14O95258 325 aaPredicted RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 PGM3O95394 542 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 SLC2A4P14672 509 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 ATP4BP51164 291 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 TPD52P55327 224 aaPredicted RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 TLE2Q04725 743 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 TIGD2Q4W5G0 525 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 LARP4Q71RC2 724 aaKnown RBP eCLIP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 NAT14Q8WUY8 206 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 STON2Q8WXE9 905 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 ATOH8Q96SQ7 321 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 HBEGFQ99075 208 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 HIST1H2AGP0C0S8 130 aaPredicted RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 HIST1H2ADP20671 130 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 MAPK8P45983 427 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 ACADVLP49748 655 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 CSRP3P50461 194 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 TRAP1Q12931 704 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 PTPRRQ15256 657 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 OGFRL1Q5TC84 451 aaPredicted RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 NCEH1Q6PIU2 408 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 SPPL2CQ8IUH8 684 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 SLC43A3Q8NBI5 491 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 SH3RF2Q8TEC5 729 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 ZNF296Q8WUU4 475 aaPredicted RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 VPS33AQ96AX1 596 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 HIST1H2AHQ96KK5 128 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 HIST1H2AJQ99878 128 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 TMEM79Q9BSE2 394 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 H2AFJQ9BTM1 129 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 NUDT4Q9NZJ9 180 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 LEF1Q9UJU2 399 aaPredicted RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 RAB26Q9ULW5 256 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 EIF3LQ9Y262 564 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 TNFAIP8O95379 198 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 ESRRBO95718 433 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 ARF5P84085 180 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 CYP51A1Q16850 503 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 KANK2Q63ZY3 851 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 TMCO2Q7Z6W1 182 aaPredicted RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 OR2T34Q8NGX1 318 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 OR2T3Q8NH03 318 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 KCNJ9Q92806 393 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 FUBP1Q96AE4 644 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 RPL10LQ96L21 214 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 PRPF18Q99633 342 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 NUSAP1Q9BXS6 441 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 PAPOLBQ9NRJ5 636 aaKnown RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 OPTCQ9UBM4 332 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 PCNTO95613 3336 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 GLYATL1P3A0A0U1RQE8 302 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 VNN2O95498 520 aa11.45□□□□□ -0.58
PDXDC1-202ENST00000396410 FASP25445 335 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms