RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 SCRN2Q96FV2 425 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 ZNF514Q96K75 400 aaPredicted RBP13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 RMND1Q9NWS8 449 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 SNX7Q9UNH6 387 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 ZDHHC9Q9Y397 364 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 CSAG2Q9Y5P2 127 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 ADGRG1Q9Y653 693 aa13.45□□□□□ -0.26
VCPKMT-201ENST00000395859 A0A0U1RQS6 177 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 GOLGA6CA6NDK9 693 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 GOLGA6BA6NDN3 693 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 FOXN3O00409 490 aaPredicted RBP13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 SOCS5O75159 536 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 MBD3O95983 291 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 JCHAINP01591 159 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 GOLGA6DP0CG33 693 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 CD1EP15812 388 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 RORAP35398 523 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 PKP1Q13835 747 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 SMTNL2Q2TAL5 461 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 DUS1LQ6P1R4 473 aaKnown RBP13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 FAM92BQ6ZTR7 304 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 FAM71AQ8IYT1 594 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 DSELQ8IZU8 1212 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 AOPEPQ8N6M6 819 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 GPT2Q8TD30 523 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 AP2M1Q96CW1 435 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 HDAC11Q96DB2 347 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 C14orf79Q96F83 325 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 SPATA32Q96LK8 384 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 AGAP3Q96P47 875 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 GSDMAQ96QA5 445 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 PSKH2Q96QS6 385 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 CRACR2AQ9BSW2 395 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 METTL5Q9NRN9 209 aaKnown RBP13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 GOLGA6AQ9NYA3 693 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 CD84Q9UIB8 345 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 PCDHGC4Q9Y5F7 938 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 PCM1Q15154 2024 aa13.44□□□□□ -0.26
VCPKMT-201ENST00000395859 NCOA6Q14686 2063 aaPredicted RBP13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 CACNA1CQ13936 2221 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 A0A1W2PQ67 120 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 A0A1W2PQJ5 194 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 PALMO75781 387 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 EBLN1P0CF75 366 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 PNMA6AP0CW24 399 aaPredicted RBP13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 CYP2A6P11509 494 aaPredicted RBP13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 ACP5P13686 325 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 AMD1P17707 334 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 TSFMP43897 325 aaKnown RBP13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 SCNN1BP51168 640 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 PDE1BQ01064 536 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 ACY1Q03154 408 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 PTSQ03393 145 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 PAK1Q13153 545 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 GALNT16Q8N428 558 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 ZNF808Q8N4W9 903 aaPredicted RBP13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 SIDT2Q8NBJ9 832 aaKnown RBP13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 ACBD4Q8NC06 268 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 EXD1Q8NHP7 514 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 JOSD2Q8TAC2 188 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 UBXN4Q92575 508 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 ZNF501Q96CX3 271 aaPredicted RBP13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 ZDHHC12Q96GR4 267 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 SGSM3Q96HU1 749 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 DHTKD1Q96HY7 919 aaPredicted RBP13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 SLC39A8Q9C0K1 460 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 RMI1Q9H9A7 625 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 SIX2Q9NPC8 291 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 FGF21Q9NSA1 209 aa13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 NOVA2Q9UNW9 492 aaKnown RBP13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.43□□□□□ -0.26
VCPKMT-201ENST00000395859 DOCK10Q96BY6 2186 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 STAB1Q9NY15 2570 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 FLNAP21333 2647 aaKnown RBP13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 TTC24A2A3L6 582 aaPredicted RBP13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 MEN1O00255 615 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 KCNN4O15554 427 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 SNX2O60749 519 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 SCRG1O75711 98 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 CPP00450 1065 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 ATP1A1P05023 1023 aaKnown RBP13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 ALPPP05187 535 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 PYGLP06737 847 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 SDC4P31431 198 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 PAPOLAP51003 745 aaKnown RBP13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 GSDMDP57764 484 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 TRAF2Q12933 501 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 RFTN1Q14699 578 aaPredicted RBP13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 ZNF324BQ6AW86 544 aaPredicted RBP13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 IGFL2Q6UWQ7 119 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 MRGPREQ86SM8 312 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 ARHGAP12Q8IWW6 846 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 D2HGDHQ8N465 521 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 ZADH2Q8N4Q0 377 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 FAM172AQ8WUF8 416 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 CCDC120Q96HB5 630 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 CCDC34Q96HJ3 373 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 WDR24Q96S15 920 aa13.42□□□□□ -0.26
VCPKMT-201ENST00000395859 CINPQ9BW66 212 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms