RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 MPP7Q5T2T1 576 aa4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 FRG2Q64ET8 278 aa4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 DUS1LQ6P1R4 473 aaKnown RBP4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 ERN2Q76MJ5 926 aaKnown RBP4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 CENPVQ7Z7K6 275 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 ZC3HC1Q86WB0 502 aaKnown RBP4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 PALB2Q86YC2 1186 aa4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 DSELQ8IZU8 1212 aa4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 FBXO39Q8N4B4 442 aa4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 AFAP1Q8N556 730 aa4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 PCDH20Q8N6Y1 951 aaKnown RBP4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 C7orf57Q8NEG2 295 aa4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 TSPAN14Q8NG11 270 aa4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 GBP5Q96PP8 586 aa4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 RAB3IPQ96QF0 476 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 TRMOQ9BU70 441 aa4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 FZD3Q9NPG1 666 aa4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 MBNL1Q9NR56 388 aaKnown RBP4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 ZBTB40Q9NUA8 1239 aa4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 PRMT7Q9NVM4 692 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 DBNLQ9UJU6 430 aaKnown RBP4.97□□□□□ -1.61
HMGB1P10-201ENST00000395823 A0A0B4J293 547 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 BECN2A8MW95 431 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 FAM90A26D6RGX4 464 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 ITM2AO43736 263 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 VPREB1P12018 145 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 UGT1A1P22309 533 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 BDKRB2P30411 391 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 GDF5P43026 501 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 ALDH7A1P49419 539 aaKnown RBP4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 TAS2R38P59533 333 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 MAD2L1Q13257 205 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 TNIP1Q15025 636 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 SYT16Q17RD7 645 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 ARMC4Q5T2S8 1044 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 SLC36A4Q6YBV0 504 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 TPRG1Q6ZUI0 275 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 SLC38A9Q8NBW4 561 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 CAMKVQ8NCB2 501 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 ZNF548Q8NEK5 533 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 ACVR1CQ8NER5 493 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 TAAR8Q969N4 342 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 SPACA9Q96E40 222 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 SLC22A12Q96S37 553 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 SMC6Q96SB8 1091 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 C2orf40Q9H1Z8 148 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 RAD21L1Q9H4I0 556 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 CATSPERBQ9H7T0 1116 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 NOL11Q9H8H0 719 aaKnown RBP4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 NOX4Q9NPH5 578 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 KRCC1Q9NPI7 259 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 TUBA8Q9NY65 449 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 RASAL2Q9UJF2 1139 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 POMT1Q9Y6A1 747 aa4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 ASTN2O75129 1339 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P10-201ENST00000395823 TRAV34A0A0B4J273 112 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 H0YGN5 161 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 CYR61O00622 381 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 PENKP01210 267 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 FSHBP01225 129 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 PRF1P14222 555 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 ERCC2P18074 760 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 ACHEP22303 614 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 LMO1P25800 156 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 FASLGP48023 281 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 MXI1P50539 228 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 PLIN5Q00G26 463 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 KRT33BQ14525 404 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 PTGR1Q14914 329 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 E2F5Q15329 346 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 VWC2Q2TAL6 325 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 DCST1Q5T197 706 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 FAM69BQ5VUD6 431 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 SHC4Q6S5L8 630 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 TRAPPC11Q7Z392 1133 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 IQCA1Q86XH1 822 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 CHERPQ8IWX8 916 aaKnown RBP4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 C16orf52Q8NHV5 167 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 MPLKIPQ8TAP9 179 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 WDR20Q8TBZ3 569 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 MR1Q95460 341 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 NXNL1Q96CM4 212 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 LRFN5Q96NI6 719 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 CITED2Q99967 270 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 THUMPD3Q9BV44 507 aaKnown RBP4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 TMEM39BQ9GZU3 492 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 C17orf75Q9HAS0 396 aa4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 DDX25Q9UHL0 483 aaKnown RBP4.95□□□□□ -1.62
HMGB1P10-201ENST00000395823 IGHV4-28A0A0C4DH34 117 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 H0YIN7 160 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 CCDC188H7C350 402 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 TRIM77I1YAP6 450 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 TMEM189-UBE2V1I3L0A0 370 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 NDUFS4O43181 175 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 SPINT2O43291 252 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 MOSPD3O75425 235 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 LINGO3P0C6S8 592 aa4.94□□□□□ -1.62
HMGB1P10-201ENST00000395823 PFKFB1P16118 471 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms