RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 TIGD7Q6NT04 549 aaPredicted RBP6.13□□□□□ -1.43
PTPN20-208ENST00000395727 ARHGAP36Q6ZRI8 547 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 H2AFVQ71UI9 128 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 CREG2Q8IUH2 290 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 ARL10Q8N8L6 244 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 OR8K1Q8NGG5 319 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 IFI44Q8TCB0 444 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 CTNNBL1Q8WYA6 563 aaPredicted RBP6.13□□□□□ -1.43
PTPN20-208ENST00000395727 HDAC11Q96DB2 347 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 SCRN2Q96FV2 425 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 COQ10AQ96MF6 247 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 NSMCE3Q96MG7 304 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 IL12RB2Q99665 862 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.13□□□□□ -1.43
PTPN20-208ENST00000395727 WRAP53Q9BUR4 548 aaKnown RBP6.13□□□□□ -1.43
PTPN20-208ENST00000395727 APOOQ9BUR5 198 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 XPO4Q9C0E2 1151 aaKnown RBP6.13□□□□□ -1.43
PTPN20-208ENST00000395727 CLPBQ9H078 707 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 KLHL25Q9H0H3 589 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 PRDM7Q9NQW5 492 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 ETNK2Q9NVF9 386 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 GFOD1Q9NXC2 390 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 ACTR10Q9NZ32 417 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 IFNKQ9P0W0 207 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 DNPEPQ9ULA0 475 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 PNMA8BQ9ULN7 279 aaPredicted RBP6.13□□□□□ -1.43
PTPN20-208ENST00000395727 PHTF1Q9UMS5 762 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 ANKRD36A6QL64 1941 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 LRRK1Q38SD2 2015 aa6.13□□□□□ -1.43
PTPN20-208ENST00000395727 ARID1BQ8NFD5 2236 aaPredicted RBP6.13□□□□□ -1.43
PTPN20-208ENST00000395727 CACNB4O00305 520 aaPredicted RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 NTN3O00634 580 aaPredicted RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 MATN3O15232 486 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 FFAR2O15552 330 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 MFAP3LO75121 409 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 GCATO75600 419 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 NEBLO76041 1014 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 HEXIM1O94992 359 aaKnown RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 PGLSO95336 258 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 CPP00450 1065 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 PYGLP06737 847 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 ANXA6P08133 673 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 CYP2A6P11509 494 aaPredicted RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 MYCLP1P12525 358 aaPredicted RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 KRT10P13645 584 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 PNLIPP16233 465 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 TSHRP16473 764 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 ZNF30P17039 623 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 CD247P20963 164 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 VIPR1P32241 457 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 ACTN2P35609 894 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 EIF2S3P41091 472 aaKnown RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 ARHGAP25P42331 645 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 MMP13P45452 471 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 LSSP48449 732 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 SCNN1BP51168 640 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 HADHBP55084 474 aaKnown RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 ADAMTS20P59510 1910 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 RPL26P61254 145 aaKnown RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 ITPR1Q14643 2758 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 NR0B2Q15466 257 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 SLC14A2Q15849 920 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 CNGA3Q16281 694 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 CLPPQ16740 277 aaPredicted RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 ISXQ2M1V0 245 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 TBC1D25Q3MII6 688 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 ZNF542PQ5EBM4 170 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 LRRC73Q5JTD7 316 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 LRRC38Q5VT99 294 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 FAM208BQ5VWN6 2430 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 NCBP2-AS2Q69YL0 99 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 VHLLQ6RSH7 139 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 ANKRD11Q6UB99 2663 aaPredicted RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 USP45Q70EL2 814 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 GKN2Q86XP6 184 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 CNGA4Q8IV77 575 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 VSTM4Q8IW00 320 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 MAP7D3Q8IWC1 876 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 RHOT2Q8IXI1 618 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 SLC35F3Q8IY50 421 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 RBFAQ8N0V3 343 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 PGBD5Q8N414 524 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 GPR156Q8NFN8 814 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 OR56A4Q8NGH8 313 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 PCDH19Q8TAB3 1148 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 LMX1AQ8TE12 382 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 NSMCE1Q8WV22 266 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 HSPH1Q92598 858 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 FUBP1Q96AE4 644 aaKnown RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 DTD2Q96FN9 168 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 TCTN2Q96GX1 697 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 LIN37Q96GY3 246 aaPredicted RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 ZNF578Q96N58 590 aaPredicted RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 LYSMD1Q96S90 227 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 TEX101Q9BY14 249 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 POLR1EQ9GZS1 481 aaKnown RBP6.12□□□□□ -1.43
PTPN20-208ENST00000395727 POLR1BQ9H9Y6 1135 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 NOD2Q9HC29 1040 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 GP6Q9HCN6 339 aa6.12□□□□□ -1.43
PTPN20-208ENST00000395727 ABHD10Q9NUJ1 306 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms