RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 PNPLA1Q8N8W4 532 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 SERPINB12Q96P63 405 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 DUSP23Q9BVJ7 150 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 TRIM31Q9BZY9 425 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 CRLS1Q9UJA2 301 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 CDC23Q9UJX2 597 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 GPR34Q9UPC5 381 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 SLC30A1Q9Y6M5 507 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 BPTFQ12830 3046 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 CCDC162PA2VCL2 907 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 H7C0S8 307 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 TPP1O14773 563 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 GRID2O43424 1007 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 FTH1P19P0C7X4 201 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 PSMA3P25788 255 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 AKT1P31749 480 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 NPY2RP49146 381 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 SARNPP82979 210 aaKnown RBP19.68■□□□□ 0.74
SNCA-203ENST00000394986 TMEM115Q12893 351 aaPredicted RBP19.68■□□□□ 0.74
SNCA-203ENST00000394986 SKIDA1Q1XH10 827 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 PCID2Q5JVF3 399 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 LDLRAP1Q5SW96 308 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 N4BP2L1Q5TBK1 243 aaPredicted RBP19.68■□□□□ 0.74
SNCA-203ENST00000394986 ZCCHC8Q6NZY4 707 aaKnown RBP19.68■□□□□ 0.74
SNCA-203ENST00000394986 CES3Q6UWW8 571 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 SYDE1Q6ZW31 735 aaPredicted RBP19.68■□□□□ 0.74
SNCA-203ENST00000394986 SNX20Q7Z614 316 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 GLRX5Q86SX6 157 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 SLC35F3Q8IY50 421 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 PIANPQ8IYJ0 282 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 KYQ8NBH2 561 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 MCUQ8NE86 351 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 FAM46DQ8NEK8 389 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 HDAC10Q969S8 669 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 C19orf43Q9BQ61 176 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 TRIM56Q9BRZ2 755 aaKnown RBP19.68■□□□□ 0.74
SNCA-203ENST00000394986 BOCQ9BWV1 1114 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 GSDMCQ9BYG8 508 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 IL22Q9GZX6 179 aa19.68■□□□□ 0.74
SNCA-203ENST00000394986 SPATS2LQ9NUQ6 558 aaKnown RBP19.68■□□□□ 0.74
SNCA-203ENST00000394986 SPTBN2O15020 2390 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 ZNF106Q9H2Y7 1883 aaKnown RBP19.67■□□□□ 0.74
SNCA-203ENST00000394986 B4DGG1 531 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 VEGFDO43915 354 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 NMBRP28336 390 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 ACTR1BP42025 376 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 CTSCP53634 463 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 ACTR1AP61163 376 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 DAB2P98082 770 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 DHX34Q14147 1143 aaKnown RBP19.67■□□□□ 0.74
SNCA-203ENST00000394986 DET1Q7L5Y6 550 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 ZNF547Q8IVP9 402 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 NXPE1Q8N323 547 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 RASGEF1AQ8N9B8 481 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 FAM181AQ8N9Y4 354 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 RMI1Q9H9A7 625 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 TAAR2Q9P1P5 351 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 GULP1Q9UBP9 304 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 KCNK6Q9Y257 313 aa19.67■□□□□ 0.74
SNCA-203ENST00000394986 COL5A1P20908 1838 aaPredicted RBP19.66■□□□□ 0.74
SNCA-203ENST00000394986 ARID1BQ8NFD5 2236 aaPredicted RBP19.66■□□□□ 0.74
SNCA-203ENST00000394986 AGAP14A8MT82 685 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 AP3B1O00203 1094 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 CHUKO15111 745 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 RAD51CO43502 376 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 GOT2P00505 430 aaKnown RBP19.66■□□□□ 0.74
SNCA-203ENST00000394986 CKMT2P17540 419 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 ACADVLP49748 655 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 B4GALNT1Q00973 533 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 ACVR1Q04771 509 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 LAMB3Q13751 1172 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 SMAD1Q15797 465 aaKnown RBP19.66■□□□□ 0.74
SNCA-203ENST00000394986 TAS2R42Q7RTR8 314 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 TRAPPC5Q8IUR0 188 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 AGGF1Q8N302 714 aaeCLIP19.66■□□□□ 0.74
SNCA-203ENST00000394986 SCG3Q8WXD2 468 aaKnown RBP19.66■□□□□ 0.74
SNCA-203ENST00000394986 DPEP2Q9H4A9 486 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 SLC23A2Q9UGH3 650 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 RIMKLBQ9ULI2 386 aa19.66■□□□□ 0.74
SNCA-203ENST00000394986 CACNA1AO00555 2505 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 TRBV5-4A0A0C4DH59 114 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 OR2AG2A6NM03 316 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 KIF2AO00139 706 aaPredicted RBP19.65■□□□□ 0.74
SNCA-203ENST00000394986 CKMT1AP12532 417 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 MLNP12872 115 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 MSH3P20585 1137 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 FOXN2P32314 431 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 CACNG1Q06432 222 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 GTF2H3Q13889 308 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 CASC4Q6P4E1 433 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 GUSBP11Q6P575 273 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 LVRNQ6Q4G3 990 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 AFTPHQ6ULP2 937 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 NLRP9Q7RTR0 991 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 ZNF572Q7Z3I7 529 aaPredicted RBP19.65■□□□□ 0.74
SNCA-203ENST00000394986 LRRTM4Q86VH4 590 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 SERPINA9Q86WD7 417 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 SDR16C5Q8N3Y7 309 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 OR6P1Q8NGX9 317 aa19.65■□□□□ 0.74
SNCA-203ENST00000394986 PATE1Q8WXA2 126 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms