RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 HAUS2Q9NVX0 235 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 IP6K2Q9UHH9 426 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 AMACRQ9UHK6 382 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 ANAPC7Q9UJX3 599 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 RPL26L1Q9UNX3 145 aaKnown RBP20.84■□□□□ 0.93
TRAF4-203ENST00000394925 POLHQ9Y253 713 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 SLC30A1Q9Y6M5 507 aa20.84■□□□□ 0.93
TRAF4-203ENST00000394925 NDUFA10O95299 355 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 VIPP01282 170 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 KRT7P08729 469 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 CCNCP24863 283 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 LEPRP48357 1165 aaKnown RBP20.83■□□□□ 0.93
TRAF4-203ENST00000394925 CD97P48960 835 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 PAFAH1B3Q15102 231 aaKnown RBP20.83■□□□□ 0.93
TRAF4-203ENST00000394925 IFI16Q16666 785 aaKnown RBP20.83■□□□□ 0.93
TRAF4-203ENST00000394925 TMEM26Q6ZUK4 368 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 ASB18Q6ZVZ8 466 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 TMEM135Q86UB9 458 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 TRIM48Q8IWZ4 208 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 CCDC13Q8IYE1 715 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 NIPA2Q8N8Q9 360 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 MLPHQ9BV36 600 aaPredicted RBP20.83■□□□□ 0.93
TRAF4-203ENST00000394925 UCK1Q9HA47 277 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 LRRC4CQ9HCJ2 640 aa20.83■□□□□ 0.93
TRAF4-203ENST00000394925 CDC14CA4D256 554 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 RGSL1A5PLK6 1076 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 ANKRD66B4E2M5 251 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 RASSF9O75901 435 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 SLC25A14O95258 325 aaPredicted RBP20.82■□□□□ 0.92
TRAF4-203ENST00000394925 XRCC1P18887 633 aaPredicted RBP20.82■□□□□ 0.92
TRAF4-203ENST00000394925 SLC19A1P41440 591 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 CLCNKAP51800 687 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 DPYSL3Q14195 570 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 PLA2G4EQ3MJ16 856 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 C4orf17Q53FE4 359 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 TDRD12Q587J7 1177 aaKnown RBP20.82■□□□□ 0.92
TRAF4-203ENST00000394925 CRTC3Q6UUV7 619 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 TSGA13Q96PP4 275 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 SPATA16Q9BXB7 569 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 THAP2Q9H0W7 228 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 ZNF768Q9H5H4 540 aaKnown RBP20.82■□□□□ 0.92
TRAF4-203ENST00000394925 ZNF624Q9P2J8 865 aaPredicted RBP20.82■□□□□ 0.92
TRAF4-203ENST00000394925 SLC23A2Q9UGH3 650 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 LNPEPQ9UIQ6 1025 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 ADGRG1Q9Y653 693 aa20.82■□□□□ 0.92
TRAF4-203ENST00000394925 KIF1CO43896 1103 aaKnown RBP20.81■□□□□ 0.92
TRAF4-203ENST00000394925 RFPL1O75677 317 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 MTA2O94776 668 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 GJC1P36383 396 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 CD86P42081 329 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 ARSEP51690 589 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 IL11RAQ14626 422 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 SEPT7Q16181 437 aaKnown RBP20.81■□□□□ 0.92
TRAF4-203ENST00000394925 INSCQ1MX18 579 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 ATP13A4Q4VNC1 1196 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 ZNF569Q5MCW4 686 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 ALS2CLQ60I27 953 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 ADGRG6Q86SQ4 1221 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 FAM71BQ8TC56 605 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 FATE1Q969F0 183 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 NUP85Q9BW27 656 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 TWSG1Q9GZX9 223 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 TRIM39Q9HCM9 518 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 DTLQ9NZJ0 730 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 KCND3Q9UK17 655 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 TLK1Q9UKI8 766 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 DNAJC16Q9Y2G8 782 aa20.81■□□□□ 0.92
TRAF4-203ENST00000394925 PIPSLA2A3N6 862 aa20.8■□□□□ 0.92
TRAF4-203ENST00000394925 PDZK1P1A8MUH7 402 aa20.8■□□□□ 0.92
TRAF4-203ENST00000394925 TOX3O15405 576 aaPredicted RBP20.8■□□□□ 0.92
TRAF4-203ENST00000394925 MMP2P08253 660 aa20.8■□□□□ 0.92
TRAF4-203ENST00000394925 CCNYL3P0C7X3 344 aa20.8■□□□□ 0.92
TRAF4-203ENST00000394925 GALNT3Q14435 633 aa20.8■□□□□ 0.92
TRAF4-203ENST00000394925 HADHQ16836 314 aaKnown RBP20.8■□□□□ 0.92
TRAF4-203ENST00000394925 FILIP1LQ4L180 1135 aa20.8■□□□□ 0.92
TRAF4-203ENST00000394925 CLEC17AQ6ZS10 378 aa20.8■□□□□ 0.92
TRAF4-203ENST00000394925 EID2BQ96D98 161 aa20.8■□□□□ 0.92
TRAF4-203ENST00000394925 PRRC2CQ9Y520 2896 aaKnown RBP20.8■□□□□ 0.92
TRAF4-203ENST00000394925 SPAG6O75602 509 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 CREG1O75629 220 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 PMS2P54278 862 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 GBE1Q04446 702 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 DNASE1L3Q13609 305 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 CCDC183Q5T5S1 534 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 CACHD1Q5VU97 1274 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 FAM92BQ6ZTR7 304 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 KCTD6Q8NC69 237 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 CCNYQ8ND76 341 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 GPR26Q8NDV2 337 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 RSC1A1Q92681 617 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 ADGRE3Q9BY15 652 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 ZFYVE1Q9HBF4 777 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 PADI1Q9ULC6 663 aa20.79■□□□□ 0.92
TRAF4-203ENST00000394925 TNRC6AQ8NDV7 1962 aaKnown RBP20.79■□□□□ 0.92
TRAF4-203ENST00000394925 MYO1FO00160 1098 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 CHUKO15111 745 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 KMOO15229 486 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 JCHAINP01591 159 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 SLC4A1P02730 911 aa20.78■□□□□ 0.92
TRAF4-203ENST00000394925 FGF5P12034 268 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms