RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 LRRC36Q1X8D7 754 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 CTSL3PQ5NE16 218 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 MPP7Q5T2T1 576 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMAD1-202ENST00000394092 RNF111Q6ZNA4 994 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 GPRIN3Q6ZVF9 776 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 DNAJB7Q7Z6W7 309 aaPredicted RBP7.13□□□□□ -1.27
SMAD1-202ENST00000394092 DDX53Q86TM3 631 aaKnown RBP7.13□□□□□ -1.27
SMAD1-202ENST00000394092 FAM217AQ8IXS0 508 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 CMTR2Q8IYT2 770 aaKnown RBP7.13□□□□□ -1.27
SMAD1-202ENST00000394092 RBFAQ8N0V3 343 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 CPXM2Q8N436 756 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 PCDH20Q8N6Y1 951 aaKnown RBP7.13□□□□□ -1.27
SMAD1-202ENST00000394092 PAF1Q8N7H5 531 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 PNPLA1Q8N8W4 532 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 GOLM1Q8NBJ4 401 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 HMGCLL1Q8TB92 370 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 ZNF296Q8WUU4 475 aaPredicted RBP7.13□□□□□ -1.27
SMAD1-202ENST00000394092 MRPS31Q92665 395 aaKnown RBP7.13□□□□□ -1.27
SMAD1-202ENST00000394092 DUS3LQ96G46 650 aaKnown RBP7.13□□□□□ -1.27
SMAD1-202ENST00000394092 PDLIM5Q96HC4 596 aaKnown RBP7.13□□□□□ -1.27
SMAD1-202ENST00000394092 ZFRQ96KR1 1074 aaKnown RBP7.13□□□□□ -1.27
SMAD1-202ENST00000394092 DEFB118Q96PH6 123 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 GBP5Q96PP8 586 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 GCNAQ96QF7 691 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 ZNF382Q96SR6 550 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 CLPBQ9H078 707 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 RNF38Q9H0F5 515 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 SDR39U1Q9NRG7 319 aaPredicted RBP7.13□□□□□ -1.27
SMAD1-202ENST00000394092 SMPD4Q9NXE4 827 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 SAGE1Q9NXZ1 904 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 SPG21Q9NZD8 308 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 CD274Q9NZQ7 290 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 IL17CQ9P0M4 197 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 TMEM181Q9P2C4 612 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 POLG2Q9UHN1 485 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 PCTPQ9UKL6 214 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 CNOT11Q9UKZ1 510 aaKnown RBP7.13□□□□□ -1.27
SMAD1-202ENST00000394092 OGDHLQ9ULD0 1010 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 MED16Q9Y2X0 877 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 SH3BP1Q9Y3L3 701 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 TRIM17Q9Y577 477 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 PCDHB9Q9Y5E1 797 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 PIKFYVEQ9Y2I7 2098 aa7.13□□□□□ -1.27
SMAD1-202ENST00000394092 C15orf38-AP3S2A0A0A6YYH1 394 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 H0YJX3 145 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 CDC7O00311 574 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 NR5A2O00482 541 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 RAD51BO15315 384 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 PGLSO95336 258 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 CD160O95971 181 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 LINGO3P0C6S8 592 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 PRSS56P0CW18 603 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 PIM1P11309 404 aaPredicted RBP7.12□□□□□ -1.27
SMAD1-202ENST00000394092 HGFP14210 728 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 VCLP18206 1134 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 HDCP19113 662 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 MZF1P28698 734 aaPredicted RBP7.12□□□□□ -1.27
SMAD1-202ENST00000394092 PTPN5P54829 565 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 SH3BGRP55822 239 aaPredicted RBP7.12□□□□□ -1.27
SMAD1-202ENST00000394092 CRY1Q16526 586 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 MPPE1Q53F39 396 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 PTRHD1Q6GMV3 140 aaKnown RBP7.12□□□□□ -1.27
SMAD1-202ENST00000394092 C8orf82Q6P1X6 216 aaPredicted RBP7.12□□□□□ -1.27
SMAD1-202ENST00000394092 PAOXQ6QHF9 649 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 LINGO4Q6UY18 593 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 SLC39A5Q6ZMH5 540 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 CYHR1Q6ZMK1 362 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 Q6ZNB5 142 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 SNX20Q7Z614 316 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 ARPINQ7Z6K5 226 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 DHFR2Q86XF0 187 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 PHYKPLQ8IUZ5 450 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 PIANPQ8IYJ0 282 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 MYO1HQ8N1T3 1032 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 ELMOD1Q8N336 334 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 RNF148Q8N7C7 305 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 SIDT2Q8NBJ9 832 aaKnown RBP7.12□□□□□ -1.27
SMAD1-202ENST00000394092 SH3RF2Q8TEC5 729 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 NSUN5Q96P11 429 aaKnown RBP7.12□□□□□ -1.27
SMAD1-202ENST00000394092 HGH1Q9BTY7 390 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 TRIM54Q9BYV2 358 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 P2RY12Q9H244 342 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 ATP13A3Q9H7F0 1226 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 COPS7BQ9H9Q2 264 aaPredicted RBP7.12□□□□□ -1.27
SMAD1-202ENST00000394092 ZFYVE1Q9HBF4 777 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 BPIFA1Q9NP55 256 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 SEMA4BQ9NPR2 832 aaPredicted RBP7.12□□□□□ -1.27
SMAD1-202ENST00000394092 ABCD2Q9UBJ2 740 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 SUN2Q9UH99 717 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 PACSIN3Q9UKS6 424 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 FCF1Q9Y324 198 aaKnown RBP7.12□□□□□ -1.27
SMAD1-202ENST00000394092 DHRS7Q9Y394 339 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 OR51B4Q9Y5P0 310 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 CPQQ9Y646 472 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 CEP350Q5VT06 3117 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 TCRBV3S1A0A5B6 114 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 GRXCR2A6NFK2 248 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 CAPN8A6NHC0 703 aa7.12□□□□□ -1.27
SMAD1-202ENST00000394092 EIF4E1BA6NMX2 242 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms