RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 LRCH3Q96II8 777 aa18.25■□□□□ 0.51
TRAF3-203ENST00000392745 SEMA3CQ99985 751 aa18.25■□□□□ 0.51
TRAF3-203ENST00000392745 MUC3BQ9H195 1237 aa18.25■□□□□ 0.51
TRAF3-203ENST00000392745 MAGEH1Q9H213 219 aa18.25■□□□□ 0.51
TRAF3-203ENST00000392745 UXTQ9UBK9 157 aaPredicted RBP18.25■□□□□ 0.51
TRAF3-203ENST00000392745 NRP2O60462 931 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 SRP72O76094 671 aaKnown RBP18.24■□□□□ 0.51
TRAF3-203ENST00000392745 HTRA4P83105 476 aaPredicted RBP18.24■□□□□ 0.51
TRAF3-203ENST00000392745 SLC44A4Q53GD3 710 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 SAMD4BQ5PRF9 694 aaKnown RBP18.24■□□□□ 0.51
TRAF3-203ENST00000392745 IL31Q6EBC2 164 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 ARL14EPQ8N8R7 260 aaPredicted RBP18.24■□□□□ 0.51
TRAF3-203ENST00000392745 OR2T34Q8NGX1 318 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 OR2T3Q8NH03 318 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 ADAMTS19Q8TE59 1207 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 PAIP1Q9H074 479 aaKnown RBP18.24■□□□□ 0.51
TRAF3-203ENST00000392745 MEAF6Q9HAF1 191 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRAF3-203ENST00000392745 TREX1Q9NSU2 369 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 NSMCE4AQ9NXX6 385 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 AURKCQ9UQB9 309 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 DENND4CQ5VZ89 1909 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 TPST1O60507 370 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 GPC4O75487 556 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 PLK1P53350 603 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 PMS2P3Q13401 168 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 C8orf82Q6P1X6 216 aaPredicted RBP18.24■□□□□ 0.51
TRAF3-203ENST00000392745 ELMO2Q96JJ3 720 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 SPON2Q9BUD6 331 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 ADI1Q9BV57 179 aa18.24■□□□□ 0.51
TRAF3-203ENST00000392745 NPLQ9BXD5 320 aaPredicted RBP18.24■□□□□ 0.51
TRAF3-203ENST00000392745 FBRSL1Q9HCM7 1045 aaKnown RBP18.24■□□□□ 0.51
TRAF3-203ENST00000392745 TUBA8Q9NY65 449 aaPredicted RBP18.24■□□□□ 0.51
TRAF3-203ENST00000392745 ATP6AP2A0A1C7CYW4 349 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 CLDN11O75508 207 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 ATP6AP2O75787 350 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 CD247P20963 164 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 CCR3P51677 355 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 SMAD3P84022 425 aaKnown RBP18.23■□□□□ 0.51
TRAF3-203ENST00000392745 RNF135Q8IUD6 432 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 MRPL57Q9BQC6 102 aaKnown RBP18.23■□□□□ 0.51
TRAF3-203ENST00000392745 RPF2Q9H7B2 306 aaKnown RBP18.23■□□□□ 0.51
TRAF3-203ENST00000392745 CXorf21Q9HAI6 301 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 IL1RL2Q9HB29 575 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 MRM3Q9HC36 420 aaKnown RBP18.23■□□□□ 0.51
TRAF3-203ENST00000392745 A0A1W2PPW3 197 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 H3BMQ9 156 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 GREM1O60565 184 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 FGBP02675 491 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 MYF6P23409 242 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 ATP5F1P24539 256 aaPredicted RBP18.23■□□□□ 0.51
TRAF3-203ENST00000392745 SERPINH1P50454 418 aaKnown RBP18.23■□□□□ 0.51
TRAF3-203ENST00000392745 PFKPQ01813 784 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 SEPT6Q14141 434 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 CSHL1Q14406 222 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 GPR107Q5VW38 600 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 FAM45BPQ6NSW5 357 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 GAREM2Q75VX8 874 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 CUZD1Q86UP6 607 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 FAM45AQ8TCE6 357 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 PTCD2Q8WV60 388 aaKnown RBP18.23■□□□□ 0.51
TRAF3-203ENST00000392745 COG8Q96MW5 612 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 POLR1EQ9GZS1 481 aaKnown RBP18.23■□□□□ 0.51
TRAF3-203ENST00000392745 NAA50Q9GZZ1 169 aaKnown RBP18.23■□□□□ 0.51
TRAF3-203ENST00000392745 RETREG1Q9H6L5 497 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 ARMC1Q9NVT9 282 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 CHD7Q9P2D1 2997 aa18.23■□□□□ 0.51
TRAF3-203ENST00000392745 LOC285095A0A1B0GVY8 99 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 CARNS1A5YM72 827 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 NRG2O14511 850 aaPredicted RBP18.22■□□□□ 0.51
TRAF3-203ENST00000392745 GIPC1O14908 333 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 SLC1A2P43004 574 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 NME5P56597 212 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 MERTKQ12866 999 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 ZNF235Q14590 738 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 SIRPB2Q5JXA9 342 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 TBCELQ5QJ74 424 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 XKR5Q6UX68 686 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 RETREG3Q86VR2 466 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 GPR65Q8IYL9 337 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 HS6ST3Q8IZP7 471 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 MFSD2AQ8NA29 543 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 ADAMTS16Q8TE57 1224 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 BADQ92934 168 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 THAP11Q96EK4 314 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 FBXL20Q96IG2 436 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 NSMCE3Q96MG7 304 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 SLC25A23Q9BV35 468 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 TMEM106CQ9BVX2 250 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 STOML2Q9UJZ1 356 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 CDH7Q9ULB5 785 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.22■□□□□ 0.51
TRAF3-203ENST00000392745 AURKAO14965 403 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 KDELR3O43731 214 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 CXCL14O95715 111 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 ATXN1LP0C7T5 689 aaKnown RBP18.22■□□□□ 0.51
TRAF3-203ENST00000392745 HMOX2P30519 316 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 DNAJB13P59910 316 aa18.22■□□□□ 0.51
TRAF3-203ENST00000392745 ZNF177Q13360 481 aaPredicted RBP18.22■□□□□ 0.51
TRAF3-203ENST00000392745 FGD3Q5JSP0 725 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms