RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 ZNF185O15231 689 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 CALB1P05937 261 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 NFKBIAP25963 317 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 PTPN4P29074 926 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 HNRNPH3P31942 346 aaKnown RBP11.63□□□□□ -0.55
SOD1-202ENST00000389995 SOX5P35711 763 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 SLC19A1P41440 591 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 RIPPLY3P57055 190 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 JAM2P57087 298 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 LAMB3Q13751 1172 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 KIR2DS5Q14953 304 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 CHRNA6Q15825 494 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 PAPD7Q5XG87 772 aaKnown RBP11.63□□□□□ -0.55
SOD1-202ENST00000389995 DCUN1D2Q6PH85 259 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 TRIM72Q6ZMU5 477 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 TMEM26Q6ZUK4 368 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 FDCSPQ8NFU4 85 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 SNRNP40Q96DI7 357 aaKnown RBP11.63□□□□□ -0.55
SOD1-202ENST00000389995 C5orf34Q96MH7 638 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 WDR24Q96S15 920 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 MGME1Q9BQP7 344 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 SLC29A3Q9BZD2 475 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 FAM207AQ9NSI2 230 aaPredicted RBP11.63□□□□□ -0.55
SOD1-202ENST00000389995 SAMSN1Q9NSI8 373 aaKnown RBP11.63□□□□□ -0.55
SOD1-202ENST00000389995 KLC4Q9NSK0 619 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 ETNK2Q9NVF9 386 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 ASF1BQ9NVP2 202 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 TAB2Q9NYJ8 693 aa11.63□□□□□ -0.55
SOD1-202ENST00000389995 CWC15Q9P013 229 aaKnown RBP11.63□□□□□ -0.55
SOD1-202ENST00000389995 ZNF624Q9P2J8 865 aaPredicted RBP11.63□□□□□ -0.55
SOD1-202ENST00000389995 A0A1W2PQ67 120 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 ANKRD62A6NC57 917 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 GOLGA6L3A6NEY3 463 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 C21orf140B9A014 251 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
SOD1-202ENST00000389995 GRID2O43424 1007 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 CLDN7O95471 211 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 CBX6O95503 412 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 FOLR1P15328 257 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 GRNP28799 593 aaKnown RBP11.62□□□□□ -0.55
SOD1-202ENST00000389995 HTR7P34969 479 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 STC1P52823 247 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 PLEKHN1Q494U1 663 aaPredicted RBP11.62□□□□□ -0.55
SOD1-202ENST00000389995 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.62□□□□□ -0.55
SOD1-202ENST00000389995 ERMARDQ5T6L9 678 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 IRGCQ6NXR0 463 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 CRTC3Q6UUV7 619 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 CYP4V2Q6ZWL3 525 aaPredicted RBP11.62□□□□□ -0.55
SOD1-202ENST00000389995 TRIM48Q8IWZ4 208 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 TTC30BQ8N4P2 665 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 CISD2Q8N5K1 135 aaKnown RBP11.62□□□□□ -0.55
SOD1-202ENST00000389995 THAP4Q8WY91 577 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 TRIM7Q9C029 511 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 EPB41L1Q9H4G0 881 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 NT5MQ9NPB1 228 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 DTLQ9NZJ0 730 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 VPS18Q9P253 973 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 ATXN10Q9UBB4 475 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 TRIM10Q9UDY6 481 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 SLC23A2Q9UGH3 650 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 SLC5A6Q9Y289 635 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 DNAJC16Q9Y2G8 782 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 PPIL1Q9Y3C6 166 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 ZNF451Q9Y4E5 1061 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 MTORP42345 2549 aa11.62□□□□□ -0.55
SOD1-202ENST00000389995 IGHV5-51A0A0C4DH38 117 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 A0A0J9YYE9 177 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 F5H423 210 aaPredicted RBP11.61□□□□□ -0.55
SOD1-202ENST00000389995 MAFKO60675 156 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 LRCH4O75427 683 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 RECKO95980 971 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 VIPP01282 170 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 TRBC1P01850 177 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 MT-ND3P03897 115 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 EBLN1P0CF75 366 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 SLC2A4P14672 509 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 ZNF8P17098 575 aaPredicted RBP11.61□□□□□ -0.55
SOD1-202ENST00000389995 AMPD1P23109 780 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 PSMA2P25787 234 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 RPL10P27635 214 aaKnown RBP11.61□□□□□ -0.55
SOD1-202ENST00000389995 MMP13P45452 471 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 RPS15P62841 145 aaKnown RBP11.61□□□□□ -0.55
SOD1-202ENST00000389995 ITKQ08881 620 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 TUBB3Q13509 450 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 DPYSQ14117 519 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 LCN10Q6JVE6 187 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 ZNF765Q7L2R6 523 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 PHYKPLQ8IUZ5 450 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 KLHL6Q8WZ60 621 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 MARVELD3Q96A59 401 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 ZNF599Q96NL3 588 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 UNKQ9C0B0 810 aaKnown RBP11.61□□□□□ -0.55
SOD1-202ENST00000389995 OR2AG1Q9H205 316 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 TAS2R14Q9NYV8 317 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 CHKBQ9Y259 395 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 FARSAQ9Y285 508 aaKnown RBP11.61□□□□□ -0.55
SOD1-202ENST00000389995 PCNX1Q96RV3 2341 aa11.61□□□□□ -0.55
SOD1-202ENST00000389995 OR52A4PA6NMU1 304 aa11.6□□□□□ -0.55
SOD1-202ENST00000389995 TMCO5BA8MYB1 307 aa11.6□□□□□ -0.55
SOD1-202ENST00000389995 TOX3O15405 576 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms