RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 COLEC12Q5KU26 742 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 ZPBP2Q6X784 338 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 PID1Q7Z2X4 250 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 CELF2-AS1Q8N7Q2 184 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 HEXDCQ8WVB3 486 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 PROX1Q92786 737 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 RDH12Q96NR8 316 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 DEPDC7Q96QD5 511 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 DDX28Q9NUL7 540 aaKnown RBP14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 ADPRHL2Q9NX46 363 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 NPAP1Q9NZP6 1156 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 FBXO5Q9UKT4 447 aa14.57□□□□□ -0.08
VPS9D1-201ENST00000389386 UBXN8O00124 270 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 HPRP00739 348 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 CXCL8P10145 99 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 IMPDH1P20839 514 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 NMBRP28336 390 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 BRMS1LQ5PSV4 323 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 SPRYD7Q5W111 196 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 CLEC6AQ6EIG7 209 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 PRR23CQ6ZRP0 262 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 SPATC1Q76KD6 591 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 ELMOD2Q8IZ81 293 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 METTL4Q8N3J2 472 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 FEM1AQ9BSK4 669 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 AKTIPQ9H8T0 292 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 SIX4Q9UIU6 781 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 AGAP5A6NIR3 686 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 CDK2AP1O14519 115 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 OGTO15294 1046 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 LRIG2O94898 1065 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 ZNF286BP0CG31 522 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 APLP1P51693 650 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 ZNF157P51786 506 aaPredicted RBP14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 ISL1P61371 349 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 SLC6A3Q01959 620 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 ARHGEF6Q15052 776 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 FAM83EQ2M2I3 478 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 IER5Q5VY09 327 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 SCUBE3Q8IX30 993 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 PYROXD2Q8N2H3 581 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 CCNYQ8ND76 341 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 DNAJB14Q8TBM8 379 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 LGALS12Q96DT0 336 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 TRIM54Q9BYV2 358 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 EPS8L2Q9H6S3 715 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 SMURF2Q9HAU4 748 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 ITM2CQ9NQX7 267 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 NSMCE4AQ9NXX6 385 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 INTS6Q9UL03 887 aaKnown RBP14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 STAP1Q9ULZ2 295 aa14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 OAS3Q9Y6K5 1087 aaKnown RBP14.56□□□□□ -0.08
VPS9D1-201ENST00000389386 CENPXA8MT69 81 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 ERVH48-1M5A8F1 160 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 UBFD1O14562 309 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 HUS1O60921 280 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 STMN1P16949 149 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 HRH2P25021 359 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 IL12AP29459 219 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 NPTX1Q15818 432 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 ZFP69Q49AA0 526 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 NEK5Q6P3R8 708 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 LCLAT1Q6UWP7 414 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 ZBTB8OSQ8IWT0 167 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 GALNT12Q8IXK2 581 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 ESX1Q8N693 406 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 CCDC185Q8N715 623 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 KIAA1958Q8N8K9 716 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 ZNF555Q8NEP9 628 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 SLC52A3Q9NQ40 469 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 AASDHPPTQ9NRN7 309 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 FAM49BQ9NUQ9 324 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 OPTCQ9UBM4 332 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 USP22Q9UPT9 525 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 CCDC154A6NI56 674 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 PDZK1P1A8MUH7 402 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 VTNP04004 478 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 GTF2E2P29084 291 aaKnown RBP14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 CD6P30203 668 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 GRIK1P39086 918 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 HTR3AP46098 478 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 FOXD4Q12950 439 aaPredicted RBP14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 NFE2Q16621 373 aaPredicted RBP14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 CDONQ4KMG0 1287 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 ZNF544Q6NX49 715 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 GATAD2AQ86YP4 633 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 MIER2Q8N344 545 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 C19orf60Q96EN9 201 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 PRDM12Q9H4Q4 367 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 TSPAN16Q9UKR8 245 aa14.55□□□□□ -0.08
VPS9D1-201ENST00000389386 A8MT66 165 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 SNX2O60749 519 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 IPO13O94829 963 aaKnown RBP14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 FKBP9O95302 570 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 TPH1P17752 444 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 M6PRP20645 277 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 TGFBR1P36897 503 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 MAP2K4P45985 399 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 POLD2P49005 469 aa14.54□□□□□ -0.08
VPS9D1-201ENST00000389386 PPP2R2BQ00005 443 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms