RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 SYVN1Q86TM6 617 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 ANKFN1Q8N957 763 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 OR56A4Q8NGH8 313 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 TRMT2BQ96GJ1 504 aaKnown RBP14.83□□□□□ -0.04
SCFD2-201ENST00000388940 ZFRQ96KR1 1074 aaKnown RBP14.83□□□□□ -0.04
SCFD2-201ENST00000388940 SLC39A3Q9BRY0 314 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 TRIM15Q9C019 465 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 MUC3BQ9H195 1237 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 COQ10BQ9H8M1 238 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 HMX1Q9NP08 348 aaPredicted RBP14.83□□□□□ -0.04
SCFD2-201ENST00000388940 AIG1Q9NVV5 245 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 BTRCQ9Y297 605 aa14.83□□□□□ -0.04
SCFD2-201ENST00000388940 NIPSNAP2O75323 286 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 TMCC1O94876 653 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 SEC24AO95486 1093 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 LATS1O95835 1130 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 CHEK2O96017 543 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 CYBBP04839 570 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 BMP2P12643 396 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 PPP3CCP48454 512 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 TXNL4AP83876 142 aaKnown RBP14.82□□□□□ -0.04
SCFD2-201ENST00000388940 NOGQ13253 232 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 CYP2R1Q6VVX0 501 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 CHERPQ8IWX8 916 aaKnown RBP14.82□□□□□ -0.04
SCFD2-201ENST00000388940 STK40Q8N2I9 435 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 SIDT2Q8NBJ9 832 aaKnown RBP14.82□□□□□ -0.04
SCFD2-201ENST00000388940 CD99L2Q8TCZ2 262 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 LRRC58Q96CX6 371 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 PDLIM5Q96HC4 596 aaKnown RBP14.82□□□□□ -0.04
SCFD2-201ENST00000388940 LRCH3Q96II8 777 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 CNBD2Q96M20 576 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 SMIM14Q96QK8 99 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 OSBPL11Q9BXB4 747 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 BRINP2Q9C0B6 783 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 RNF38Q9H0F5 515 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 P2RY12Q9H244 342 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 CCM2LQ9NUG4 571 aaPredicted RBP14.82□□□□□ -0.04
SCFD2-201ENST00000388940 LHX3Q9UBR4 397 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 ZNF225Q9UK10 706 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 CNOT6Q9ULM6 557 aaKnown RBP14.82□□□□□ -0.04
SCFD2-201ENST00000388940 A0A1W2PP18 115 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 C7orf72A4D263 438 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 FZD6O60353 706 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 OR1I1O60431 355 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 ABLIM3O94929 683 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 CLPTM1O96005 669 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 INHAP05111 366 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 TFAP2AP05549 437 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 RPL17P18621 184 aaKnown RBP14.82□□□□□ -0.04
SCFD2-201ENST00000388940 SLC6A2P23975 617 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 HK3P52790 923 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 NME5P56597 212 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 ZRANB3Q5FWF4 1079 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 LCN8Q6JVE9 175 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 HMBOX1Q6NT76 420 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 GPSM1Q86YR5 675 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 EEF1AKMT1Q8WVE0 214 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 HGH1Q9BTY7 390 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 CFHR5Q9BXR6 569 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 TRIM54Q9BYV2 358 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 TRIM4Q9C037 500 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 SEMA6AQ9H2E6 1030 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 MUC13Q9H3R2 512 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 CHCHD3Q9NX63 227 aaKnown RBP14.82□□□□□ -0.04
SCFD2-201ENST00000388940 CMTM6Q9NX76 183 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 PCDHA9Q9Y5H5 950 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 SNX13Q9Y5W8 968 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 COMMD3-BMI1R4GMX3 469 aa14.82□□□□□ -0.04
SCFD2-201ENST00000388940 TYW5A2RUC4 315 aaKnown RBP14.81□□□□□ -0.04
SCFD2-201ENST00000388940 TSPAN3O60637 253 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 C1RP00736 705 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 ATP6V1B2P21281 511 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 ALDH7A1P49419 539 aaKnown RBP14.81□□□□□ -0.04
SCFD2-201ENST00000388940 PDCD4Q53EL6 469 aaKnown RBP14.81□□□□□ -0.04
SCFD2-201ENST00000388940 C16orf59Q7L2K0 433 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 ERMP1Q7Z2K6 904 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 REM2Q8IYK8 340 aaPredicted RBP14.81□□□□□ -0.04
SCFD2-201ENST00000388940 ZNF461Q8TAF7 563 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 NAT14Q8WUY8 206 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 WBP2Q969T9 261 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 LINGO1Q96FE5 620 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 CLSTN3Q9BQT9 956 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 IL17CQ9P0M4 197 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 ACTR3BQ9P1U1 418 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 PCDHGB4Q9UN71 923 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 TIMM22Q9Y584 194 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 PCDHGB5Q9Y5G0 923 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 E2F3O00716 465 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 HNRNPRO43390 633 aaKnown RBP14.81□□□□□ -0.04
SCFD2-201ENST00000388940 SNX2O60749 519 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 PSMC3P17980 439 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 GRIA3P42263 894 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 ZFP36L2P47974 494 aaKnown RBP14.81□□□□□ -0.04
SCFD2-201ENST00000388940 AGTR2P50052 363 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 DIO3P55073 304 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 SH3BGRP55822 239 aaPredicted RBP14.81□□□□□ -0.04
SCFD2-201ENST00000388940 ECT2LQ008S8 904 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 CACNG1Q06432 222 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 APOFQ13790 326 aa14.81□□□□□ -0.04
SCFD2-201ENST00000388940 RCAN2Q14206 197 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms