RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 TRIM39Q9HCM9 518 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 PPANQ9NQ55 473 aaKnown RBP18.6■□□□□ 0.57
SMN2-202ENST00000380742 ZDHHC3Q9NYG2 299 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 ATXN10Q9UBB4 475 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 ANKRD6Q9Y2G4 727 aa18.6■□□□□ 0.57
SMN2-202ENST00000380742 ZFC3H1O60293 1989 aaKnown RBP18.6■□□□□ 0.57
SMN2-202ENST00000380742 IGLV3-16A0A075B6K0 115 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 ACSL3O95573 720 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 ASMTLO95671 621 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 FUCA1P04066 466 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 CFIP05156 583 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 TUBBP07437 444 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 OGNP20774 298 aaKnown RBP18.59■□□□□ 0.57
SMN2-202ENST00000380742 HTR1BP28222 390 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 C21orf59P57076 290 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 TMEM115Q12893 351 aaPredicted RBP18.59■□□□□ 0.57
SMN2-202ENST00000380742 CTBP1Q13363 440 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 PTK2BQ14289 1009 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 TYSND1Q2T9J0 566 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 TEDDM1Q5T9Z0 273 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 ZNF470Q6ECI4 717 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 MRNIPQ6NTE8 343 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 SLC23A3Q6PIS1 610 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 ENPP7Q6UWV6 458 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 CERS6Q6ZMG9 384 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 CYS1Q717R9 158 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 RABEPKQ7Z6M1 372 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 CILP2Q8IUL8 1156 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 DENND6AQ8IWF6 608 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 COPS8Q99627 209 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 OR2AG1Q9H205 316 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 CAAP1Q9H8G2 361 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 FGF22Q9HCT0 170 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 MRPL40Q9NQ50 206 aaKnown RBP18.59■□□□□ 0.57
SMN2-202ENST00000380742 FSCN3Q9NQT6 498 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 SMYD2Q9NRG4 433 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 SLC17A6Q9P2U8 582 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 RAPGEFL1Q9UHV5 662 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 SLC17A4Q9Y2C5 497 aa18.59■□□□□ 0.57
SMN2-202ENST00000380742 WDR87Q6ZQQ6 2873 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 MAGEC1O60732 1142 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 SPAG6O75602 509 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 PIAS1O75925 651 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 LMNAP02545 664 aaKnown RBP18.58■□□□□ 0.57
SMN2-202ENST00000380742 RETP07949 1114 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 KELP23276 732 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 AKT1P31749 480 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 SLC1A2P43004 574 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 CTSKP43235 329 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 MGAT5Q09328 741 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 EIF2B5Q13144 721 aaKnown RBP18.58■□□□□ 0.57
SMN2-202ENST00000380742 KIF19Q2TAC6 998 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 TRIM61Q5EBN2 209 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 ZNF789Q5FWF6 425 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 AARS2Q5JTZ9 985 aaKnown RBP18.58■□□□□ 0.57
SMN2-202ENST00000380742 LYPLAL1Q5VWZ2 237 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 TRMT10CQ7L0Y3 403 aaKnown RBP18.58■□□□□ 0.57
SMN2-202ENST00000380742 SDCCAG8Q86SQ7 713 aaPredicted RBP18.58■□□□□ 0.57
SMN2-202ENST00000380742 CNTN4Q8IWV2 1026 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 LMNTD2Q8IXW0 634 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 OR56A4Q8NGH8 313 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 CALML6Q8TD86 181 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 FBF1Q8TES7 1133 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 NAT14Q8WUY8 206 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 OR1E3Q8WZA6 343 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 SKA1Q96BD8 255 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 FAM167BQ9BTA0 163 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 SLC6A14Q9UN76 642 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 PCYT1BQ9Y5K3 369 aaPredicted RBP18.58■□□□□ 0.57
SMN2-202ENST00000380742 SNX11Q9Y5W9 270 aa18.58■□□□□ 0.57
SMN2-202ENST00000380742 KNL1Q8NG31 2342 aa18.58■□□□□ 0.56
SMN2-202ENST00000380742 CXorf49A8MYA2 514 aaPredicted RBP18.57■□□□□ 0.56
SMN2-202ENST00000380742 TNFRSF10CO14798 259 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 OR1I1O60431 355 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 S1PR4O95977 384 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 ZNF8P17098 575 aaPredicted RBP18.57■□□□□ 0.56
SMN2-202ENST00000380742 MSH3P20585 1137 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 TTPAP49638 278 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 MPP1Q00013 466 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 ITIH4Q14624 930 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 ALG11Q2TAA5 492 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 EMBQ6PCB8 327 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 MARK2Q7KZI7 788 aaKnown RBP18.57■□□□□ 0.56
SMN2-202ENST00000380742 RASGEF1AQ8N9B8 481 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 C2CD4AQ8NCU7 369 aaPredicted RBP18.57■□□□□ 0.56
SMN2-202ENST00000380742 TSACCQ96A04 125 aaPredicted RBP18.57■□□□□ 0.56
SMN2-202ENST00000380742 PDXPQ96GD0 296 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 TCF12Q99081 682 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 PHOX2BQ99453 314 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 EPB41L4BQ9H329 900 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 VPS18Q9P253 973 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 KLF15Q9UIH9 416 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 RABGEF1Q9UJ41 708 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 GMEB2Q9UKD1 530 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 FBXO5Q9UKT4 447 aa18.57■□□□□ 0.56
SMN2-202ENST00000380742 FAM159BA6NKW6 160 aa18.56■□□□□ 0.56
SMN2-202ENST00000380742 PROB1E7EW31 1015 aa18.56■□□□□ 0.56
SMN2-202ENST00000380742 RIPK2O43353 540 aa18.56■□□□□ 0.56
SMN2-202ENST00000380742 SGTAO43765 313 aa18.56■□□□□ 0.56
SMN2-202ENST00000380742 VEGFDO43915 354 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms