RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ALPIP09923 528 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 SRCP12931 536 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 CCNIQ14094 377 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 MYLK3Q32MK0 819 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 PIGGQ5H8A4 983 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 ZDHHC20Q5W0Z9 365 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 CLEC6AQ6EIG7 209 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 ADAMTSL2Q86TH1 951 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 HPS6Q86YV9 775 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 CMTM8Q8IZV2 173 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 PCDH20Q8N6Y1 951 aaKnown RBP22.89■■□□□ 1.26
VPS16-201ENST00000380443 EEF1AKMT1Q8WVE0 214 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 TWIST2Q8WVJ9 160 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 RAD9AQ99638 391 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 VCX3BQ9H321 246 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 SLC25A13Q9UJS0 675 aa22.89■■□□□ 1.26
VPS16-201ENST00000380443 INTS6Q9UL03 887 aaKnown RBP22.89■■□□□ 1.26
VPS16-201ENST00000380443 RANBP2P49792 3224 aaKnown RBP22.89■■□□□ 1.26
VPS16-201ENST00000380443 NPEPPSL1A6NEC2 478 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 PRAMEF1O95521 474 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 HOXA9P31269 272 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 HNF1BP35680 557 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 SPAM1P38567 509 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 PSMD8P48556 350 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 RGS4P49798 205 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 NFATC2Q13469 925 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 C9orf50Q5SZB4 431 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 PTRHD1Q6GMV3 140 aaKnown RBP22.89■■□□□ 1.25
VPS16-201ENST00000380443 SERPINA9Q86WD7 417 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 PLPP6Q8IY26 295 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 OR56A4Q8NGH8 313 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 TRPC4APQ8TEL6 797 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 NRG4Q8WWG1 115 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 HERVK_113Q902F9 699 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 FAM136AQ96C01 138 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 ZNF641Q96N77 438 aaPredicted RBP22.89■■□□□ 1.25
VPS16-201ENST00000380443 CDRT15Q96T59 188 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 ASB8Q9H765 288 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 TBC1D14Q9P2M4 693 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 SARDHQ9UL12 918 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 CLEC4EQ9ULY5 219 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 RWDD3Q9Y3V2 267 aa22.89■■□□□ 1.25
VPS16-201ENST00000380443 HELZP42694 1942 aaKnown RBP22.88■■□□□ 1.25
VPS16-201ENST00000380443 BBIP1A8MTZ0 92 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 CCL16O15467 120 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 PRAMEF12O95522 483 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 CHEK2O96017 543 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 BMPR1AP36894 532 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 MRPL19P49406 292 aaKnown RBP22.88■■□□□ 1.25
VPS16-201ENST00000380443 UBE3AQ05086 875 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 GEN1Q17RS7 908 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 DGKKQ5KSL6 1271 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 CYHR1Q6ZMK1 362 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 TPRG1Q6ZUI0 275 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 KBTBD6Q86V97 674 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 SPNS2Q8IVW8 549 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 SHKBP1Q8TBC3 707 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 ECHDC3Q96DC8 303 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 MARK4Q96L34 752 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 SLC30A3Q99726 388 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 PLK2Q9NYY3 685 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 KLHL42Q9P2K6 505 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 GALPQ9UBC7 116 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 IKZF3Q9UKT9 509 aa22.88■■□□□ 1.25
VPS16-201ENST00000380443 GLYATL1P3A0A0U1RQE8 302 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 GIPC1O14908 333 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 CRCPO75575 148 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 POP4O95707 220 aaKnown RBP22.87■■□□□ 1.25
VPS16-201ENST00000380443 UROSP10746 265 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 ME2P23368 584 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 PKNOX1P55347 436 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 GRIK2Q13002 908 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 GSTA3Q16772 222 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 ZNF423Q2M1K9 1284 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 AGKQ53H12 422 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 USP45Q70EL2 814 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 TTC16Q8NEE8 873 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 SLC26A7Q8TE54 656 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 SCRN2Q96FV2 425 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 AKTIPQ9H8T0 292 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 IL26Q9NPH9 171 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 PCTPQ9UKL6 214 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 WASF2Q9Y6W5 498 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 GAPDHSO14556 408 aaPredicted RBP22.87■■□□□ 1.25
VPS16-201ENST00000380443 LIN7AO14910 233 aaPredicted RBP22.87■■□□□ 1.25
VPS16-201ENST00000380443 ESRRBO95718 433 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 ENO3P13929 434 aaPredicted RBP22.87■■□□□ 1.25
VPS16-201ENST00000380443 TCF3P15923 654 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 LBPP18428 481 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 MMEL1Q495T6 779 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 ZFP1Q6P2D0 407 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 C22orf39Q6P5X5 142 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 MACC1Q6ZN28 852 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 SPATA19Q7Z5L4 167 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 CPNE9Q8IYJ1 553 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 OTUB2Q96DC9 234 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 SUV39H2Q9H5I1 410 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 LATS2Q9NRM7 1088 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 TMEM45AQ9NWC5 275 aa22.87■■□□□ 1.25
VPS16-201ENST00000380443 CD274Q9NZQ7 290 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms